Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TMEM238LA0A1B0GVL6 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.91■□□□□ 0.3
TMEM238LA0A1B0GVL6 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM238LA0A1B0GVL6 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC16.91■□□□□ 0.3
TMEM238LA0A1B0GVL6 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM238LA0A1B0GVL6 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
TMEM238LA0A1B0GVL6 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM238LA0A1B0GVL6 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM238LA0A1B0GVL6 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM238LA0A1B0GVL6 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM238LA0A1B0GVL6 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TMEM238LA0A1B0GVL6 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM238LA0A1B0GVL6 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM238LA0A1B0GVL6 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM238LA0A1B0GVL6 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM238LA0A1B0GVL6 SLC25A24-204ENST00000569674 2357 ntBASIC16.9■□□□□ 0.3
TMEM238LA0A1B0GVL6 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM238LA0A1B0GVL6 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM238LA0A1B0GVL6 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM238LA0A1B0GVL6 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
TMEM238LA0A1B0GVL6 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TMEM238LA0A1B0GVL6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM238LA0A1B0GVL6 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM238LA0A1B0GVL6 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM238LA0A1B0GVL6 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM238LA0A1B0GVL6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEM238LA0A1B0GVL6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
TMEM238LA0A1B0GVL6 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC16.89■□□□□ 0.29
TMEM238LA0A1B0GVL6 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEM238LA0A1B0GVL6 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC16.89■□□□□ 0.29
TMEM238LA0A1B0GVL6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM238LA0A1B0GVL6 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM238LA0A1B0GVL6 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM238LA0A1B0GVL6 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
TMEM238LA0A1B0GVL6 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM238LA0A1B0GVL6 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM238LA0A1B0GVL6 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TMEM238LA0A1B0GVL6 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM238LA0A1B0GVL6 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
TMEM238LA0A1B0GVL6 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM238LA0A1B0GVL6 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TMEM238LA0A1B0GVL6 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TMEM238LA0A1B0GVL6 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM238LA0A1B0GVL6 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM238LA0A1B0GVL6 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM238LA0A1B0GVL6 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM238LA0A1B0GVL6 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM238LA0A1B0GVL6 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM238LA0A1B0GVL6 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM238LA0A1B0GVL6 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
TMEM238LA0A1B0GVL6 AC068473.5-201ENST00000616428 2072 ntBASIC16.87■□□□□ 0.29
TMEM238LA0A1B0GVL6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM238LA0A1B0GVL6 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM238LA0A1B0GVL6 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM238LA0A1B0GVL6 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM238LA0A1B0GVL6 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM238LA0A1B0GVL6 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM238LA0A1B0GVL6 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TMEM238LA0A1B0GVL6 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM238LA0A1B0GVL6 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TMEM238LA0A1B0GVL6 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC16.86■□□□□ 0.29
TMEM238LA0A1B0GVL6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM238LA0A1B0GVL6 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TMEM238LA0A1B0GVL6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.86■□□□□ 0.29
TMEM238LA0A1B0GVL6 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC16.86■□□□□ 0.29
TMEM238LA0A1B0GVL6 AF106564.1-201ENST00000607058 2553 ntBASIC16.85■□□□□ 0.29
TMEM238LA0A1B0GVL6 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM238LA0A1B0GVL6 AC142381.3-201ENST00000568208 1670 ntBASIC16.85■□□□□ 0.29
TMEM238LA0A1B0GVL6 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
TMEM238LA0A1B0GVL6 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
TMEM238LA0A1B0GVL6 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM238LA0A1B0GVL6 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC16.85■□□□□ 0.29
TMEM238LA0A1B0GVL6 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC16.85■□□□□ 0.29
TMEM238LA0A1B0GVL6 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
TMEM238LA0A1B0GVL6 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TMEM238LA0A1B0GVL6 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM238LA0A1B0GVL6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM238LA0A1B0GVL6 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM238LA0A1B0GVL6 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM238LA0A1B0GVL6 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TMEM238LA0A1B0GVL6 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
TMEM238LA0A1B0GVL6 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM238LA0A1B0GVL6 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TMEM238LA0A1B0GVL6 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC16.83■□□□□ 0.28
TMEM238LA0A1B0GVL6 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TMEM238LA0A1B0GVL6 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM238LA0A1B0GVL6 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM238LA0A1B0GVL6 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
TMEM238LA0A1B0GVL6 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC16.82■□□□□ 0.28
TMEM238LA0A1B0GVL6 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM238LA0A1B0GVL6 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM238LA0A1B0GVL6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM238LA0A1B0GVL6 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM238LA0A1B0GVL6 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM238LA0A1B0GVL6 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM238LA0A1B0GVL6 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC16.81■□□□□ 0.28
TMEM238LA0A1B0GVL6 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM238LA0A1B0GVL6 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC16.8■□□□□ 0.28
TMEM238LA0A1B0GVL6 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM238LA0A1B0GVL6 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms