Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRGV5A0A0B4J1U4 KRT8P33-201ENST00000508125 1423 ntBASIC21.86■■□□□ 1.09
TRGV5A0A0B4J1U4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
TRGV5A0A0B4J1U4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.85■■□□□ 1.09
TRGV5A0A0B4J1U4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRGV5A0A0B4J1U4 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRGV5A0A0B4J1U4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRGV5A0A0B4J1U4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRGV5A0A0B4J1U4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRGV5A0A0B4J1U4 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.84■■□□□ 1.09
TRGV5A0A0B4J1U4 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TRGV5A0A0B4J1U4 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRGV5A0A0B4J1U4 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRGV5A0A0B4J1U4 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.09
TRGV5A0A0B4J1U4 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRGV5A0A0B4J1U4 YBX1P4-201ENST00000392794 808 ntBASIC21.83■■□□□ 1.09
TRGV5A0A0B4J1U4 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRGV5A0A0B4J1U4 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRGV5A0A0B4J1U4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRGV5A0A0B4J1U4 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRGV5A0A0B4J1U4 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRGV5A0A0B4J1U4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRGV5A0A0B4J1U4 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRGV5A0A0B4J1U4 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
TRGV5A0A0B4J1U4 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRGV5A0A0B4J1U4 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TRGV5A0A0B4J1U4 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.82■■□□□ 1.08
TRGV5A0A0B4J1U4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.82■■□□□ 1.08
TRGV5A0A0B4J1U4 AC087393.1-201ENST00000582896 145 ntBASIC21.82■■□□□ 1.08
TRGV5A0A0B4J1U4 PVT1_1.1-201ENST00000615125 194 ntBASIC21.82■■□□□ 1.08
TRGV5A0A0B4J1U4 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRGV5A0A0B4J1U4 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.82■■□□□ 1.08
TRGV5A0A0B4J1U4 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRGV5A0A0B4J1U4 KRT18P10-201ENST00000388836 1287 ntBASIC21.81■■□□□ 1.08
TRGV5A0A0B4J1U4 RPS2P7-201ENST00000447334 885 ntBASIC21.81■■□□□ 1.08
TRGV5A0A0B4J1U4 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.81■■□□□ 1.08
TRGV5A0A0B4J1U4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.8■■□□□ 1.08
TRGV5A0A0B4J1U4 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRGV5A0A0B4J1U4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRGV5A0A0B4J1U4 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.8■■□□□ 1.08
TRGV5A0A0B4J1U4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.8■■□□□ 1.08
TRGV5A0A0B4J1U4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRGV5A0A0B4J1U4 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.8■■□□□ 1.08
TRGV5A0A0B4J1U4 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRGV5A0A0B4J1U4 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRGV5A0A0B4J1U4 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.79■■□□□ 1.08
TRGV5A0A0B4J1U4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRGV5A0A0B4J1U4 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.79■■□□□ 1.08
TRGV5A0A0B4J1U4 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRGV5A0A0B4J1U4 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.79■■□□□ 1.08
TRGV5A0A0B4J1U4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRGV5A0A0B4J1U4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRGV5A0A0B4J1U4 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRGV5A0A0B4J1U4 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRGV5A0A0B4J1U4 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRGV5A0A0B4J1U4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.78■■□□□ 1.08
TRGV5A0A0B4J1U4 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRGV5A0A0B4J1U4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRGV5A0A0B4J1U4 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRGV5A0A0B4J1U4 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRGV5A0A0B4J1U4 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TRGV5A0A0B4J1U4 AC103834.1-201ENST00000520383 144 ntBASIC21.77■■□□□ 1.08
TRGV5A0A0B4J1U4 MIR4508-201ENST00000584178 70 ntBASIC21.77■■□□□ 1.08
TRGV5A0A0B4J1U4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.76■■□□□ 1.07
TRGV5A0A0B4J1U4 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRGV5A0A0B4J1U4 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRGV5A0A0B4J1U4 AC019171.1-201ENST00000601251 1056 ntBASIC21.76■■□□□ 1.07
TRGV5A0A0B4J1U4 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRGV5A0A0B4J1U4 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRGV5A0A0B4J1U4 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRGV5A0A0B4J1U4 AL451085.2-201ENST00000605085 799 ntBASIC21.75■■□□□ 1.07
TRGV5A0A0B4J1U4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRGV5A0A0B4J1U4 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRGV5A0A0B4J1U4 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRGV5A0A0B4J1U4 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.74■■□□□ 1.07
TRGV5A0A0B4J1U4 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRGV5A0A0B4J1U4 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRGV5A0A0B4J1U4 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRGV5A0A0B4J1U4 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRGV5A0A0B4J1U4 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
TRGV5A0A0B4J1U4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
TRGV5A0A0B4J1U4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
TRGV5A0A0B4J1U4 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRGV5A0A0B4J1U4 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRGV5A0A0B4J1U4 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.73■■□□□ 1.07
TRGV5A0A0B4J1U4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.72■■□□□ 1.07
TRGV5A0A0B4J1U4 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRGV5A0A0B4J1U4 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRGV5A0A0B4J1U4 LONRF2P2-201ENST00000439212 571 ntBASIC21.72■■□□□ 1.07
TRGV5A0A0B4J1U4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.72■■□□□ 1.07
TRGV5A0A0B4J1U4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRGV5A0A0B4J1U4 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.72■■□□□ 1.07
TRGV5A0A0B4J1U4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRGV5A0A0B4J1U4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRGV5A0A0B4J1U4 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRGV5A0A0B4J1U4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.71■■□□□ 1.07
TRGV5A0A0B4J1U4 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRGV5A0A0B4J1U4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.71■■□□□ 1.07
TRGV5A0A0B4J1U4 AL035685.1-201ENST00000636663 812 ntBASIC21.71■■□□□ 1.07
TRGV5A0A0B4J1U4 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms