Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 AL591684.3-201ENST00000605187 298 ntBASIC21.29■■□□□ 1
CHD1LQ86WJ1 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
CHD1LQ86WJ1 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CHD1LQ86WJ1 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC21.29■■□□□ 1
CHD1LQ86WJ1 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CHD1LQ86WJ1 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHD1LQ86WJ1 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC21.29■■□□□ 1
CHD1LQ86WJ1 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC21.29■■□□□ 1
CHD1LQ86WJ1 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHD1LQ86WJ1 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CHD1LQ86WJ1 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHD1LQ86WJ1 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CHD1LQ86WJ1 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC21.28■■□□□ 1
CHD1LQ86WJ1 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHD1LQ86WJ1 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
CHD1LQ86WJ1 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CHD1LQ86WJ1 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC21.28■■□□□ 1
CHD1LQ86WJ1 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC21.28■■□□□ 1
CHD1LQ86WJ1 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
CHD1LQ86WJ1 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHD1LQ86WJ1 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHD1LQ86WJ1 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC21.28■■□□□ 1
CHD1LQ86WJ1 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC21.28■■□□□ 1
CHD1LQ86WJ1 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.28■■□□□ 1
CHD1LQ86WJ1 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC21.28■■□□□ 1
CHD1LQ86WJ1 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC21.28■■□□□ 1
CHD1LQ86WJ1 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC21.28■■□□□ 1
CHD1LQ86WJ1 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC21.28■■□□□ 1
CHD1LQ86WJ1 CYB561-217ENST00000582997 877 ntTSL 5 BASIC21.28■■□□□ 1
CHD1LQ86WJ1 COPE-211ENST00000600932 1144 ntTSL 5 BASIC21.28■■□□□ 1
CHD1LQ86WJ1 AP001269.4-201ENST00000609611 512 ntBASIC21.28■■□□□ 1
CHD1LQ86WJ1 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC21.28■■□□□ 1
CHD1LQ86WJ1 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC21.28■■□□□ 1
CHD1LQ86WJ1 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHD1LQ86WJ1 OR6D1P-202ENST00000641007 5290 ntBASIC21.28■■□□□ 1
CHD1LQ86WJ1 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC21.28■■□□□ 1
CHD1LQ86WJ1 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CHD1LQ86WJ1 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHD1LQ86WJ1 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CHD1LQ86WJ1 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHD1LQ86WJ1 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC21.28■■□□□ 1
CHD1LQ86WJ1 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CHD1LQ86WJ1 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CHD1LQ86WJ1 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC21.28■■□□□ 1
CHD1LQ86WJ1 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CHD1LQ86WJ1 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC21.27■■□□□ 1
CHD1LQ86WJ1 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC21.27■■□□□ 1
CHD1LQ86WJ1 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHD1LQ86WJ1 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CHD1LQ86WJ1 AC097637.2-201ENST00000624096 1997 ntBASIC21.27■■□□□ 1
CHD1LQ86WJ1 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHD1LQ86WJ1 KRT16P4-201ENST00000453883 522 ntBASIC21.27■■□□□ 1
CHD1LQ86WJ1 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.27■■□□□ 1
CHD1LQ86WJ1 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHD1LQ86WJ1 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
CHD1LQ86WJ1 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC21.27■■□□□ 1
CHD1LQ86WJ1 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.27■■□□□ 1
CHD1LQ86WJ1 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHD1LQ86WJ1 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHD1LQ86WJ1 UBALD1-205ENST00000590891 2641 ntBASIC21.27■■□□□ 1
CHD1LQ86WJ1 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CHD1LQ86WJ1 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
CHD1LQ86WJ1 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHD1LQ86WJ1 AP005117.1-201ENST00000584346 1413 ntBASIC21.27■■□□□ 1
CHD1LQ86WJ1 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHD1LQ86WJ1 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CHD1LQ86WJ1 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CHD1LQ86WJ1 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CHD1LQ86WJ1 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CHD1LQ86WJ1 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
CHD1LQ86WJ1 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHD1LQ86WJ1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHD1LQ86WJ1 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC21.26■□□□□ 0.99
CHD1LQ86WJ1 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CHD1LQ86WJ1 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC21.26■□□□□ 0.99
CHD1LQ86WJ1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC21.26■□□□□ 0.99
CHD1LQ86WJ1 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHD1LQ86WJ1 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CHD1LQ86WJ1 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHD1LQ86WJ1 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHD1LQ86WJ1 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
CHD1LQ86WJ1 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CHD1LQ86WJ1 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC21.26■□□□□ 0.99
CHD1LQ86WJ1 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CHD1LQ86WJ1 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHD1LQ86WJ1 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC21.26■□□□□ 0.99
CHD1LQ86WJ1 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHD1LQ86WJ1 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHD1LQ86WJ1 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC21.26■□□□□ 0.99
CHD1LQ86WJ1 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CHD1LQ86WJ1 AC132008.2-207ENST00000454517 770 ntBASIC21.26■□□□□ 0.99
CHD1LQ86WJ1 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC21.26■□□□□ 0.99
CHD1LQ86WJ1 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.26■□□□□ 0.99
CHD1LQ86WJ1 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.26■□□□□ 0.99
CHD1LQ86WJ1 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHD1LQ86WJ1 PCDHB17P-201ENST00000539533 2393 ntBASIC21.26■□□□□ 0.99
CHD1LQ86WJ1 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHD1LQ86WJ1 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHD1LQ86WJ1 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHD1LQ86WJ1 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms