Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
MRPL54Q6P161 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.07□□□□□ -0.32
MRPL54Q6P161 AC104640.1-201ENST00000562617 2109 ntBASIC13.07□□□□□ -0.32
MRPL54Q6P161 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
MRPL54Q6P161 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MRPL54Q6P161 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MRPL54Q6P161 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MRPL54Q6P161 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MRPL54Q6P161 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
MRPL54Q6P161 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.07□□□□□ -0.32
MRPL54Q6P161 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
MRPL54Q6P161 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
MRPL54Q6P161 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
MRPL54Q6P161 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MRPL54Q6P161 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC13.07□□□□□ -0.32
MRPL54Q6P161 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.07□□□□□ -0.32
MRPL54Q6P161 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
MRPL54Q6P161 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.07□□□□□ -0.32
MRPL54Q6P161 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.07□□□□□ -0.32
MRPL54Q6P161 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
MRPL54Q6P161 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL54Q6P161 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL54Q6P161 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC13.06□□□□□ -0.32
MRPL54Q6P161 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL54Q6P161 AL365203.3-201ENST00000609742 2057 ntBASIC13.06□□□□□ -0.32
MRPL54Q6P161 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.06□□□□□ -0.32
MRPL54Q6P161 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL54Q6P161 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
MRPL54Q6P161 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL54Q6P161 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
MRPL54Q6P161 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
MRPL54Q6P161 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.06□□□□□ -0.32
MRPL54Q6P161 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL54Q6P161 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL54Q6P161 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL54Q6P161 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC13.06□□□□□ -0.32
MRPL54Q6P161 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL54Q6P161 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL54Q6P161 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
MRPL54Q6P161 AC092384.3-202ENST00000564646 2873 ntBASIC13.06□□□□□ -0.32
MRPL54Q6P161 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC13.06□□□□□ -0.32
MRPL54Q6P161 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL54Q6P161 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL54Q6P161 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL54Q6P161 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL54Q6P161 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL54Q6P161 UNC93B4-201ENST00000505679 747 ntBASIC13.06□□□□□ -0.32
MRPL54Q6P161 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC13.06□□□□□ -0.32
MRPL54Q6P161 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC13.06□□□□□ -0.32
MRPL54Q6P161 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
MRPL54Q6P161 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL54Q6P161 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC13.06□□□□□ -0.32
MRPL54Q6P161 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC13.06□□□□□ -0.32
MRPL54Q6P161 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL54Q6P161 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL54Q6P161 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
MRPL54Q6P161 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL54Q6P161 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC13.06□□□□□ -0.32
MRPL54Q6P161 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.06□□□□□ -0.32
MRPL54Q6P161 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL54Q6P161 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC13.06□□□□□ -0.32
MRPL54Q6P161 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL54Q6P161 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL54Q6P161 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.06□□□□□ -0.32
MRPL54Q6P161 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC13.06□□□□□ -0.32
MRPL54Q6P161 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
MRPL54Q6P161 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC13.06□□□□□ -0.32
MRPL54Q6P161 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MRPL54Q6P161 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.05□□□□□ -0.32
MRPL54Q6P161 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MRPL54Q6P161 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MRPL54Q6P161 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MRPL54Q6P161 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
MRPL54Q6P161 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MRPL54Q6P161 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
MRPL54Q6P161 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
MRPL54Q6P161 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MRPL54Q6P161 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.05□□□□□ -0.32
MRPL54Q6P161 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MRPL54Q6P161 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
MRPL54Q6P161 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
MRPL54Q6P161 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.05□□□□□ -0.32
MRPL54Q6P161 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MRPL54Q6P161 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MRPL54Q6P161 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
MRPL54Q6P161 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
MRPL54Q6P161 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MRPL54Q6P161 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
MRPL54Q6P161 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
MRPL54Q6P161 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
MRPL54Q6P161 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.05□□□□□ -0.32
MRPL54Q6P161 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
MRPL54Q6P161 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC13.05□□□□□ -0.32
MRPL54Q6P161 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC13.05□□□□□ -0.32
MRPL54Q6P161 KRT18P23-201ENST00000435622 1283 ntBASIC13.05□□□□□ -0.32
MRPL54Q6P161 DDX43P3-201ENST00000441064 443 ntBASIC13.05□□□□□ -0.32
MRPL54Q6P161 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
MRPL54Q6P161 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC13.05□□□□□ -0.32
MRPL54Q6P161 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
MRPL54Q6P161 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms