Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 PVRIG2P-201ENST00000435460 978 ntBASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 MIR3917-201ENST00000580971 93 ntBASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 AP000525.1-201ENST00000608286 694 ntBASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 CCR12P-201ENST00000446203 998 ntBASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 AC124947.2-201ENST00000547118 1133 ntBASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 AC024909.3-201ENST00000611513 2257 ntBASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ANKRD55Q3KP44 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ANKRD55Q3KP44 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ANKRD55Q3KP44 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ANKRD55Q3KP44 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.34□□□□□ -0.11
ANKRD55Q3KP44 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.34□□□□□ -0.11
ANKRD55Q3KP44 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ANKRD55Q3KP44 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ANKRD55Q3KP44 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ANKRD55Q3KP44 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ANKRD55Q3KP44 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.34□□□□□ -0.11
ANKRD55Q3KP44 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ANKRD55Q3KP44 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.34□□□□□ -0.11
ANKRD55Q3KP44 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ANKRD55Q3KP44 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ANKRD55Q3KP44 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms