Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3BP20337 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3BP20337 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
RAB3BP20337 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.16■□□□□ 0.02
RAB3BP20337 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3BP20337 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3BP20337 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.16■□□□□ 0.02
RAB3BP20337 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
RAB3BP20337 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3BP20337 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC15.16■□□□□ 0.02
RAB3BP20337 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.16■□□□□ 0.02
RAB3BP20337 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3BP20337 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
RAB3BP20337 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB3BP20337 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB3BP20337 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3BP20337 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3BP20337 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3BP20337 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3BP20337 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RAB3BP20337 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3BP20337 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3BP20337 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3BP20337 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3BP20337 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3BP20337 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB3BP20337 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.15■□□□□ 0.02
RAB3BP20337 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.15■□□□□ 0.02
RAB3BP20337 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB3BP20337 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RAB3BP20337 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.15■□□□□ 0.02
RAB3BP20337 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3BP20337 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3BP20337 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB3BP20337 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB3BP20337 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3BP20337 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
RAB3BP20337 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB3BP20337 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB3BP20337 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3BP20337 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3BP20337 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3BP20337 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
RAB3BP20337 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.15■□□□□ 0.02
RAB3BP20337 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3BP20337 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3BP20337 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3BP20337 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3BP20337 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3BP20337 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC15.15■□□□□ 0.02
RAB3BP20337 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB3BP20337 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB3BP20337 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.15■□□□□ 0.02
RAB3BP20337 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.15■□□□□ 0.02
RAB3BP20337 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3BP20337 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.15■□□□□ 0.02
RAB3BP20337 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.15■□□□□ 0.02
RAB3BP20337 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
RAB3BP20337 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB3BP20337 LINC00554-201ENST00000564841 3011 ntBASIC15.15■□□□□ 0.02
RAB3BP20337 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3BP20337 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
RAB3BP20337 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3BP20337 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB3BP20337 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3BP20337 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3BP20337 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3BP20337 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3BP20337 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB3BP20337 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3BP20337 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3BP20337 AC132872.4-202ENST00000622924 2756 ntBASIC15.14■□□□□ 0.01
RAB3BP20337 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
RAB3BP20337 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3BP20337 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RAB3BP20337 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3BP20337 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3BP20337 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3BP20337 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB3BP20337 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB3BP20337 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3BP20337 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3BP20337 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3BP20337 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3BP20337 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB3BP20337 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3BP20337 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3BP20337 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3BP20337 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3BP20337 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3BP20337 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3BP20337 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3BP20337 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
RAB3BP20337 C2orf69P3-201ENST00000565542 1120 ntBASIC15.14■□□□□ 0.01
RAB3BP20337 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB3BP20337 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.14■□□□□ 0.01
RAB3BP20337 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB3BP20337 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB3BP20337 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RAB3BP20337 AL049637.2-201ENST00000641778 930 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms