Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.76■□□□□ 0.43
MT-CO1P00395 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MT-CO1P00395 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-CO1P00395 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-CO1P00395 RPS2P28-201ENST00000314255 741 ntBASIC17.76■□□□□ 0.43
MT-CO1P00395 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MT-CO1P00395 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-CO1P00395 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.76■□□□□ 0.43
MT-CO1P00395 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
MT-CO1P00395 SIGLEC30P-201ENST00000455569 941 ntBASIC17.76■□□□□ 0.43
MT-CO1P00395 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-CO1P00395 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.76■□□□□ 0.43
MT-CO1P00395 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.76■□□□□ 0.43
MT-CO1P00395 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.76■□□□□ 0.43
MT-CO1P00395 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
MT-CO1P00395 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.76■□□□□ 0.43
MT-CO1P00395 AC120114.3-201ENST00000611923 658 ntBASIC17.76■□□□□ 0.43
MT-CO1P00395 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.76■□□□□ 0.43
MT-CO1P00395 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-CO1P00395 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
MT-CO1P00395 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
MT-CO1P00395 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
MT-CO1P00395 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
MT-CO1P00395 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-CO1P00395 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-CO1P00395 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-CO1P00395 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-CO1P00395 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
MT-CO1P00395 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-CO1P00395 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
MT-CO1P00395 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-CO1P00395 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
MT-CO1P00395 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MT-CO1P00395 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-CO1P00395 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.75■□□□□ 0.43
MT-CO1P00395 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
MT-CO1P00395 MYCLP1-201ENST00000372451 1075 ntBASIC17.75■□□□□ 0.43
MT-CO1P00395 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-CO1P00395 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-CO1P00395 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.75■□□□□ 0.43
MT-CO1P00395 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.75■□□□□ 0.43
MT-CO1P00395 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.75■□□□□ 0.43
MT-CO1P00395 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.75■□□□□ 0.43
MT-CO1P00395 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.75■□□□□ 0.43
MT-CO1P00395 AC093909.1-201ENST00000504731 1122 ntBASIC17.75■□□□□ 0.43
MT-CO1P00395 SLC25A1P1-201ENST00000528351 927 ntBASIC17.75■□□□□ 0.43
MT-CO1P00395 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.75■□□□□ 0.43
MT-CO1P00395 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.75■□□□□ 0.43
MT-CO1P00395 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.75■□□□□ 0.43
MT-CO1P00395 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.75■□□□□ 0.43
MT-CO1P00395 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.75■□□□□ 0.43
MT-CO1P00395 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.75■□□□□ 0.43
MT-CO1P00395 AC008735.5-201ENST00000623544 497 ntBASIC17.75■□□□□ 0.43
MT-CO1P00395 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
MT-CO1P00395 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-CO1P00395 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
MT-CO1P00395 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-CO1P00395 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.75■□□□□ 0.43
MT-CO1P00395 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MT-CO1P00395 AP002414.3-201ENST00000589352 1468 ntBASIC17.75■□□□□ 0.43
MT-CO1P00395 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-CO1P00395 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-CO1P00395 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
MT-CO1P00395 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-CO1P00395 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.74■□□□□ 0.43
MT-CO1P00395 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.74■□□□□ 0.43
MT-CO1P00395 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
MT-CO1P00395 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
MT-CO1P00395 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.74■□□□□ 0.43
MT-CO1P00395 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MT-CO1P00395 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MT-CO1P00395 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
MT-CO1P00395 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.74■□□□□ 0.43
MT-CO1P00395 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
MT-CO1P00395 HLA-J-201ENST00000462773 1622 ntBASIC17.74■□□□□ 0.43
MT-CO1P00395 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.74■□□□□ 0.43
MT-CO1P00395 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.74■□□□□ 0.43
MT-CO1P00395 AL022342.1-201ENST00000400363 863 ntBASIC17.74■□□□□ 0.43
MT-CO1P00395 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.74■□□□□ 0.43
MT-CO1P00395 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.74■□□□□ 0.43
MT-CO1P00395 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.74■□□□□ 0.43
MT-CO1P00395 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.74■□□□□ 0.43
MT-CO1P00395 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MT-CO1P00395 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MT-CO1P00395 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MT-CO1P00395 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MT-CO1P00395 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.74■□□□□ 0.43
MT-CO1P00395 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MT-CO1P00395 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MT-CO1P00395 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MT-CO1P00395 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
MT-CO1P00395 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
MT-CO1P00395 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
MT-CO1P00395 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
MT-CO1P00395 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MT-CO1P00395 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
MT-CO1P00395 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MT-CO1P00395 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
MT-CO1P00395 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
MT-CO1P00395 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms