Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 SART3-203ENST00000546611 1184 ntBASIC16.3■□□□□ 0.2
PRAMEF2O60811 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.3■□□□□ 0.2
PRAMEF2O60811 STK25P1-201ENST00000585406 838 ntBASIC16.3■□□□□ 0.2
PRAMEF2O60811 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.3■□□□□ 0.2
PRAMEF2O60811 AL049840.3-201ENST00000602669 611 ntBASIC16.3■□□□□ 0.2
PRAMEF2O60811 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF2O60811 AC117500.6-201ENST00000624871 588 ntBASIC16.3■□□□□ 0.2
PRAMEF2O60811 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF2O60811 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.3■□□□□ 0.2
PRAMEF2O60811 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF2O60811 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF2O60811 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.3■□□□□ 0.2
PRAMEF2O60811 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.3■□□□□ 0.2
PRAMEF2O60811 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF2O60811 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF2O60811 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF2O60811 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF2O60811 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF2O60811 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF2O60811 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.29■□□□□ 0.2
PRAMEF2O60811 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
PRAMEF2O60811 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF2O60811 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF2O60811 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.29■□□□□ 0.2
PRAMEF2O60811 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF2O60811 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.29■□□□□ 0.2
PRAMEF2O60811 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
PRAMEF2O60811 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF2O60811 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF2O60811 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF2O60811 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.29■□□□□ 0.2
PRAMEF2O60811 AC021087.4-201ENST00000563761 564 ntBASIC16.29■□□□□ 0.2
PRAMEF2O60811 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.29■□□□□ 0.2
PRAMEF2O60811 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF2O60811 AC006538.3-201ENST00000612495 578 ntBASIC16.29■□□□□ 0.2
PRAMEF2O60811 AL139288.1-201ENST00000623748 933 ntBASIC16.29■□□□□ 0.2
PRAMEF2O60811 AC073592.5-201ENST00000624854 528 ntBASIC16.29■□□□□ 0.2
PRAMEF2O60811 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF2O60811 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
PRAMEF2O60811 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF2O60811 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF2O60811 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.29■□□□□ 0.2
PRAMEF2O60811 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PRAMEF2O60811 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF2O60811 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF2O60811 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF2O60811 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF2O60811 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PRAMEF2O60811 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF2O60811 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF2O60811 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.28■□□□□ 0.2
PRAMEF2O60811 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.28■□□□□ 0.2
PRAMEF2O60811 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF2O60811 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.28■□□□□ 0.2
PRAMEF2O60811 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.28■□□□□ 0.2
PRAMEF2O60811 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.28■□□□□ 0.2
PRAMEF2O60811 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF2O60811 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
PRAMEF2O60811 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF2O60811 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.28■□□□□ 0.2
PRAMEF2O60811 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF2O60811 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PRAMEF2O60811 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF2O60811 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.28■□□□□ 0.2
PRAMEF2O60811 STK19B-204ENST00000512515 211 ntBASIC16.28■□□□□ 0.2
PRAMEF2O60811 KRT18P58-201ENST00000527480 1120 ntBASIC16.28■□□□□ 0.2
PRAMEF2O60811 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.28■□□□□ 0.2
PRAMEF2O60811 AC106730.1-201ENST00000566722 1090 ntBASIC16.28■□□□□ 0.2
PRAMEF2O60811 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
PRAMEF2O60811 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.28■□□□□ 0.2
PRAMEF2O60811 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PRAMEF2O60811 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PRAMEF2O60811 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF2O60811 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF2O60811 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF2O60811 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF2O60811 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF2O60811 AC012313.1-201ENST00000593393 3059 ntBASIC16.28■□□□□ 0.2
PRAMEF2O60811 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.28■□□□□ 0.2
PRAMEF2O60811 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF2O60811 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.28■□□□□ 0.2
PRAMEF2O60811 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF2O60811 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PRAMEF2O60811 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF2O60811 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF2O60811 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF2O60811 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF2O60811 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF2O60811 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF2O60811 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
PRAMEF2O60811 AC106820.2-201ENST00000563775 3264 ntBASIC16.27■□□□□ 0.2
PRAMEF2O60811 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF2O60811 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF2O60811 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.27■□□□□ 0.2
PRAMEF2O60811 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF2O60811 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF2O60811 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PRAMEF2O60811 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PRAMEF2O60811 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PRAMEF2O60811 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms