Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 AD001527.2-201ENST00000622994 785 ntBASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 AL121956.5-201ENST00000625261 221 ntBASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRBV7S3A2A0A539 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV7S3A2A0A539 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TCRBV7S3A2A0A539 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TCRBV7S3A2A0A539 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV7S3A2A0A539 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.61■□□□□ 0.41
TCRBV7S3A2A0A539 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV7S3A2A0A539 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
TCRBV7S3A2A0A539 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV7S3A2A0A539 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV7S3A2A0A539 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TCRBV7S3A2A0A539 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TCRBV7S3A2A0A539 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
TCRBV7S3A2A0A539 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.61■□□□□ 0.41
TCRBV7S3A2A0A539 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV7S3A2A0A539 BX276092.5-203ENST00000456199 560 ntBASIC17.61■□□□□ 0.41
TCRBV7S3A2A0A539 STK19B-204ENST00000512515 211 ntBASIC17.61■□□□□ 0.41
TCRBV7S3A2A0A539 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.61■□□□□ 0.41
TCRBV7S3A2A0A539 AC009533.2-201ENST00000543664 586 ntBASIC17.61■□□□□ 0.41
TCRBV7S3A2A0A539 AL121672.3-201ENST00000608644 468 ntBASIC17.61■□□□□ 0.41
TCRBV7S3A2A0A539 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.61■□□□□ 0.41
TCRBV7S3A2A0A539 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.61■□□□□ 0.41
TCRBV7S3A2A0A539 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV7S3A2A0A539 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TCRBV7S3A2A0A539 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TCRBV7S3A2A0A539 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV7S3A2A0A539 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV7S3A2A0A539 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.61■□□□□ 0.41
TCRBV7S3A2A0A539 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TCRBV7S3A2A0A539 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV7S3A2A0A539 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TCRBV7S3A2A0A539 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TCRBV7S3A2A0A539 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCRBV7S3A2A0A539 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
TCRBV7S3A2A0A539 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV7S3A2A0A539 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV7S3A2A0A539 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV7S3A2A0A539 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV7S3A2A0A539 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
TCRBV7S3A2A0A539 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV7S3A2A0A539 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.6■□□□□ 0.41
TCRBV7S3A2A0A539 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV7S3A2A0A539 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV7S3A2A0A539 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV7S3A2A0A539 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV7S3A2A0A539 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV7S3A2A0A539 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV7S3A2A0A539 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV7S3A2A0A539 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV7S3A2A0A539 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.6■□□□□ 0.41
TCRBV7S3A2A0A539 AP002383.4-201ENST00000442518 975 ntBASIC17.6■□□□□ 0.41
TCRBV7S3A2A0A539 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.6■□□□□ 0.41
TCRBV7S3A2A0A539 AC124947.2-201ENST00000547118 1133 ntBASIC17.6■□□□□ 0.41
TCRBV7S3A2A0A539 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.6■□□□□ 0.41
TCRBV7S3A2A0A539 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TCRBV7S3A2A0A539 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV7S3A2A0A539 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.6■□□□□ 0.41
TCRBV7S3A2A0A539 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV7S3A2A0A539 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TCRBV7S3A2A0A539 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV7S3A2A0A539 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.6■□□□□ 0.41
TCRBV7S3A2A0A539 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV7S3A2A0A539 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV7S3A2A0A539 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TCRBV7S3A2A0A539 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.6■□□□□ 0.41
TCRBV7S3A2A0A539 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV7S3A2A0A539 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV7S3A2A0A539 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TCRBV7S3A2A0A539 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV7S3A2A0A539 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV7S3A2A0A539 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV7S3A2A0A539 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
TCRBV7S3A2A0A539 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV7S3A2A0A539 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.59■□□□□ 0.41
TCRBV7S3A2A0A539 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV7S3A2A0A539 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV7S3A2A0A539 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV7S3A2A0A539 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TCRBV7S3A2A0A539 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms