Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 CNOT1-215ENST00000569020 535 ntTSL 421.42■■□□□ 1.023e-6■□□□□ 9.8
DROSHAQ9NRR4 CNOT1-206ENST00000564557 582 ntTSL 320.78■□□□□ 0.923e-6■□□□□ 9.8
DROSHAQ9NRR4 CNOT1-220ENST00000569916 599 ntTSL 320.07■□□□□ 0.83e-6■□□□□ 9.8
DROSHAQ9NRR4 CNOT1-217ENST00000569263 304 ntTSL 219.95■□□□□ 0.783e-6■□□□□ 9.8
DROSHAQ9NRR4 CNOT1-213ENST00000568158 496 ntTSL 319.84■□□□□ 0.773e-6■□□□□ 9.8
DROSHAQ9NRR4 CNOT1-207ENST00000565605 739 ntTSL 414.81□□□□□ -0.043e-6■□□□□ 9.8
DROSHAQ9NRR4 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC8.49□□□□□ -1.053e-6■□□□□ 9.8
DROSHAQ9NRR4 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC8.08□□□□□ -1.123e-6■□□□□ 9.8
DROSHAQ9NRR4 CNOT1-211ENST00000567188 7830 ntTSL 1 (best)7.55□□□□□ -1.23e-6■□□□□ 9.8
DROSHAQ9NRR4 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.493e-6■□□□□ 9.8
DROSHAQ9NRR4 EPS8L2-209ENST00000527199 540 ntTSL 334.51■■■■□ 3.126e-6■□□□□ 9.8
DROSHAQ9NRR4 EPS8L2-206ENST00000526380 545 ntTSL 324.88■■□□□ 1.576e-6■□□□□ 9.8
DROSHAQ9NRR4 EPS8L2-214ENST00000529680 551 ntTSL 423.14■■□□□ 1.296e-6■□□□□ 9.8
DROSHAQ9NRR4 MIR1914-201ENST00000607800 80 ntBASIC19.04■□□□□ 0.644e-9■□□□□ 9.8
DROSHAQ9NRR4 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC16.87■□□□□ 0.293e-9■□□□□ 9.8
DROSHAQ9NRR4 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.243e-9■□□□□ 9.8
DROSHAQ9NRR4 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.193e-9■□□□□ 9.8
DROSHAQ9NRR4 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.193e-9■□□□□ 9.8
DROSHAQ9NRR4 RERE-216ENST00000505225 533 ntTSL 211.3□□□□□ -0.63e-9■□□□□ 9.8
DROSHAQ9NRR4 RERE-203ENST00000400907 2973 ntTSL 5 BASIC11.3□□□□□ -0.63e-9■□□□□ 9.8
DROSHAQ9NRR4 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC43.59■■■■■ 4.575e-7■□□□□ 9.8
DROSHAQ9NRR4 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC37.78■■■■□ 3.645e-7■□□□□ 9.8
DROSHAQ9NRR4 MZT2B-204ENST00000455239 401 ntAPPRIS ALT2 TSL 227.02■■□□□ 1.925e-7■□□□□ 9.8
DROSHAQ9NRR4 MZT2B-203ENST00000425361 455 ntAPPRIS ALT2 TSL 226.63■■□□□ 1.855e-7■□□□□ 9.8
DROSHAQ9NRR4 MZT2B-205ENST00000457492 435 ntAPPRIS ALT2 TSL 521.67■■□□□ 1.065e-7■□□□□ 9.8
DROSHAQ9NRR4 DYNC1H1-201ENST00000360184 14333 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.511e-8■□□□□ 9.8
DROSHAQ9NRR4 ANKRD17-210ENST00000561029 2717 ntTSL 530.33■■■□□ 2.452e-6■□□□□ 9.8
DROSHAQ9NRR4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC25.41■■□□□ 1.662e-6■□□□□ 9.8
DROSHAQ9NRR4 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.472e-6■□□□□ 9.8
DROSHAQ9NRR4 ANKRD17-202ENST00000358602 10784 ntAPPRIS P4 TSL 5 BASIC13.45□□□□□ -0.262e-6■□□□□ 9.8
DROSHAQ9NRR4 ANKRD17-207ENST00000558247 8456 ntAPPRIS ALT2 TSL 1 (best)7.72□□□□□ -1.172e-6■□□□□ 9.8
DROSHAQ9NRR4 ATP2A2-203ENST00000377685 5702 ntTSL 525.07■■□□□ 1.64e-26■□□□□ 9.8
DROSHAQ9NRR4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.134e-26■□□□□ 9.8
DROSHAQ9NRR4 ATP2A2-211ENST00000552636 529 ntTSL 4 BASIC19.47■□□□□ 0.714e-26■□□□□ 9.8
DROSHAQ9NRR4 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC38.39■■■■□ 3.744e-8■□□□□ 9.8
DROSHAQ9NRR4 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC36.64■■■■□ 3.464e-8■□□□□ 9.8
DROSHAQ9NRR4 TPI1-202ENST00000396705 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.514e-8■□□□□ 9.8
DROSHAQ9NRR4 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.564e-13■□□□□ 9.8
DROSHAQ9NRR4 GMNN-205ENST00000468943 679 ntTSL 224.81■■□□□ 1.564e-13■□□□□ 9.8
DROSHAQ9NRR4 GMNN-202ENST00000356509 1133 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.564e-13■□□□□ 9.8
DROSHAQ9NRR4 MIIP-203ENST00000466860 1709 ntTSL 526.73■■□□□ 1.871e-6■□□□□ 9.7
DROSHAQ9NRR4 MIIP-207ENST00000498685 1392 ntTSL 226.69■■□□□ 1.861e-6■□□□□ 9.7
DROSHAQ9NRR4 MIIP-205ENST00000478749 779 ntTSL 223.52■■□□□ 1.361e-6■□□□□ 9.7
DROSHAQ9NRR4 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.321e-6■□□□□ 9.7
DROSHAQ9NRR4 MIIP-202ENST00000460823 955 ntTSL 523.27■■□□□ 1.311e-6■□□□□ 9.7
DROSHAQ9NRR4 GPS1-225ENST00000585084 997 ntTSL 344.18■■■■■ 4.665e-7■□□□□ 9.7
DROSHAQ9NRR4 GPS1-222ENST00000583983 556 ntTSL 533.72■■■□□ 2.995e-7■□□□□ 9.7
DROSHAQ9NRR4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC29.19■■■□□ 2.269e-11■□□□□ 9.7
DROSHAQ9NRR4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC27.77■■■□□ 2.045e-7■□□□□ 9.7
DROSHAQ9NRR4 GPS1-221ENST00000583961 581 ntTSL 527.12■■□□□ 1.935e-7■□□□□ 9.7
DROSHAQ9NRR4 GPS1-212ENST00000580716 567 ntTSL 426.64■■□□□ 1.865e-7■□□□□ 9.7
DROSHAQ9NRR4 GPS1-216ENST00000582327 561 ntTSL 426.64■■□□□ 1.865e-7■□□□□ 9.7
DROSHAQ9NRR4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC25.41■■□□□ 1.665e-7■□□□□ 9.7
DROSHAQ9NRR4 ING5-212ENST00000493578 1136 ntTSL 324.98■■□□□ 1.595e-7■□□□□ 9.7
DROSHAQ9NRR4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.485e-7■□□□□ 9.7
DROSHAQ9NRR4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.065e-7■□□□□ 9.7
DROSHAQ9NRR4 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.929e-11■□□□□ 9.7
DROSHAQ9NRR4 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC19.81■□□□□ 0.769e-11■□□□□ 9.7
DROSHAQ9NRR4 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC19.6■□□□□ 0.739e-11■□□□□ 9.7
DROSHAQ9NRR4 ING5-204ENST00000445620 662 ntTSL 39.89□□□□□ -0.835e-7■□□□□ 9.7
DROSHAQ9NRR4 CLOCK-210ENST00000513033 567 ntTSL 427.8■■■□□ 2.044e-10■□□□□ 9.7
DROSHAQ9NRR4 CLOCK-208ENST00000509151 476 ntTSL 424.51■■□□□ 1.514e-10■□□□□ 9.7
DROSHAQ9NRR4 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.784e-10■□□□□ 9.7
DROSHAQ9NRR4 CLOCK-206ENST00000506923 616 ntTSL 35.04□□□□□ -1.64e-10■□□□□ 9.7
DROSHAQ9NRR4 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.643e-22■□□□□ 9.7
DROSHAQ9NRR4 ANKRD12-206ENST00000577992 390 ntTSL 334.81■■■■□ 3.161e-7■□□□□ 9.7
DROSHAQ9NRR4 ANKRD12-209ENST00000585234 313 ntTSL 323.26■■□□□ 1.311e-7■□□□□ 9.7
DROSHAQ9NRR4 ANKRD12-204ENST00000540578 1338 ntTSL 1 (best)20.71■□□□□ 0.911e-7■□□□□ 9.7
DROSHAQ9NRR4 ANKRD12-207ENST00000581635 631 ntTSL 417.55■□□□□ 0.41e-7■□□□□ 9.7
DROSHAQ9NRR4 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.151e-7■□□□□ 9.7
DROSHAQ9NRR4 EIF2AK1-203ENST00000431744 806 ntTSL 339.99■■■■□ 3.994e-20■□□□□ 9.7
DROSHAQ9NRR4 EIF2AK1-204ENST00000446699 573 ntTSL 439.99■■■■□ 3.994e-20■□□□□ 9.7
DROSHAQ9NRR4 EIF2AK1-205ENST00000461493 631 ntTSL 230.89■■■□□ 2.544e-20■□□□□ 9.7
DROSHAQ9NRR4 EIF2AK1-206ENST00000463213 791 ntTSL 225.44■■□□□ 1.664e-20■□□□□ 9.7
DROSHAQ9NRR4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.635e-13■□□□□ 9.7
DROSHAQ9NRR4 MVD-216ENST00000568709 809 ntTSL 528.44■■■□□ 2.141e-6■□□□□ 9.7
DROSHAQ9NRR4 VEGFA-214ENST00000493786 551 ntTSL 211.55□□□□□ -0.562e-22■□□□□ 9.7
DROSHAQ9NRR4 FKBP10-204ENST00000464180 1129 ntTSL 233.98■■■■□ 3.033e-9■□□□□ 9.7
DROSHAQ9NRR4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.813e-9■□□□□ 9.7
DROSHAQ9NRR4 FKBP10-207ENST00000490938 837 ntTSL 224.12■■□□□ 1.453e-9■□□□□ 9.7
DROSHAQ9NRR4 FKBP10-206ENST00000489591 2826 ntTSL 223.8■■□□□ 1.43e-9■□□□□ 9.7
DROSHAQ9NRR4 FKBP10-203ENST00000455106 1965 ntTSL 221.6■■□□□ 1.053e-9■□□□□ 9.7
DROSHAQ9NRR4 UBE2L3-203ENST00000496722 3451 ntTSL 219.79■□□□□ 0.762e-7■□□□□ 9.7
DROSHAQ9NRR4 UBE2L3-204ENST00000545681 2932 ntTSL 2 BASIC18.71■□□□□ 0.592e-7■□□□□ 9.7
DROSHAQ9NRR4 UBE2L3-201ENST00000342192 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.452e-7■□□□□ 9.7
DROSHAQ9NRR4 UBE2L3-202ENST00000458578 3007 ntTSL 2 BASIC15.82■□□□□ 0.122e-7■□□□□ 9.7
DROSHAQ9NRR4 WNT3-201ENST00000225512 3355 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.156e-9■□□□□ 9.7
DROSHAQ9NRR4 STAG3L5P-PVRIG2P-PILRB-202ENST00000444874 2661 ntTSL 220.62■□□□□ 0.892e-6■□□□□ 9.7
DROSHAQ9NRR4 STAG3L5P-PVRIG2P-PILRB-204ENST00000472646 553 ntTSL 517.06■□□□□ 0.322e-6■□□□□ 9.7
DROSHAQ9NRR4 STAG3L5P-PVRIG2P-PILRB-201ENST00000310771 3634 ntTSL 2 BASIC13.56□□□□□ -0.242e-6■□□□□ 9.7
DROSHAQ9NRR4 SRRM2-221ENST00000574866 638 ntTSL 327.33■■□□□ 1.972e-61■□□□□ 9.7
DROSHAQ9NRR4 PCK1-201ENST00000319441 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.213e-7■□□□□ 9.7
DROSHAQ9NRR4 PCK1-202ENST00000467047 5074 ntTSL 1 (best)12.05□□□□□ -0.483e-7■□□□□ 9.7
DROSHAQ9NRR4 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC43.11■■■■■ 4.496e-7■□□□□ 9.6
DROSHAQ9NRR4 MAPK1-201ENST00000215832 11022 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.636e-7■□□□□ 9.6
DROSHAQ9NRR4 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.591e-9■□□□□ 9.6
DROSHAQ9NRR4 FKBP8-210ENST00000599540 1140 ntTSL 220.28■□□□□ 0.843e-7■□□□□ 9.6
DROSHAQ9NRR4 RPL4-216ENST00000569438 565 ntTSL 522.28■■□□□ 1.161e-19■□□□□ 9.6
DROSHAQ9NRR4 RPL4-212ENST00000566622 817 ntTSL 221.59■■□□□ 1.051e-19■□□□□ 9.6
DROSHAQ9NRR4 RPL4-211ENST00000566491 593 ntTSL 219.51■□□□□ 0.711e-19■□□□□ 9.6
Retrieved 100 of 16,331 protein–RNA pairs in 272.7 ms