RNA–Protein interactions for RNA: ENST00000566491.1

RPL4-211, Transcript of ribosomal protein L4, humanhuman

TSL 2

Gene RPL4, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL4-211ENST00000566491 NISCHQ9Y2I1 1504 aa30.27■■■□□ 2.44
RPL4-211ENST00000566491 CCDC180Q9P1Z9 1646 aa26.87■■□□□ 1.89
RPL4-211ENST00000566491 ABCC9O60706 1549 aa25.5■■□□□ 1.67
RPL4-211ENST00000566491 ZCCHC6Q5VYS8 1495 aaKnown RBP25.4■■□□□ 1.66
RPL4-211ENST00000566491 DCAF1Q9Y4B6 1507 aa25.12■■□□□ 1.61
RPL4-211ENST00000566491 MYO15BQ96JP2 1530 aa25.02■■□□□ 1.6
RPL4-211ENST00000566491 NACADO15069 1562 aa24.96■■□□□ 1.59
RPL4-211ENST00000566491 RB1CC1Q8TDY2 1594 aa24.86■■□□□ 1.57
RPL4-211ENST00000566491 DCAF8L2P0C7V8 631 aa24.63■■□□□ 1.53
RPL4-211ENST00000566491 UNC13AQ9UPW8 1703 aa24.62■■□□□ 1.53
RPL4-211ENST00000566491 SCRIBQ14160 1630 aa24.45■■□□□ 1.5
RPL4-211ENST00000566491 BICRAQ9NZM4 1560 aa24.21■■□□□ 1.47
RPL4-211ENST00000566491 SHROOM4Q9ULL8 1493 aa24.04■■□□□ 1.44
RPL4-211ENST00000566491 PABPN1Q86U42 306 aaKnown RBP eCLIP23.75■■□□□ 1.39
RPL4-211ENST00000566491 CECR2Q9BXF3 1484 aa23.49■■□□□ 1.35
RPL4-211ENST00000566491 SMARCA4P51532 1647 aa23.47■■□□□ 1.35
RPL4-211ENST00000566491 EIF4G1Q04637 1599 aaKnown RBP23.45■■□□□ 1.34
RPL4-211ENST00000566491 BAZ1AQ9NRL2 1556 aaPredicted RBP23.43■■□□□ 1.34
RPL4-211ENST00000566491 MROH2BQ7Z745 1585 aa23.35■■□□□ 1.33
RPL4-211ENST00000566491 PEG3Q9GZU2 1588 aa23.25■■□□□ 1.31
RPL4-211ENST00000566491 CC2D2AQ9P2K1 1620 aa23.23■■□□□ 1.31
RPL4-211ENST00000566491 WIZO95785 1651 aa23.2■■□□□ 1.3
RPL4-211ENST00000566491 RSF1Q96T23 1441 aaPredicted RBP23.19■■□□□ 1.3
RPL4-211ENST00000566491 SMARCA2P51531 1590 aa23.1■■□□□ 1.29
RPL4-211ENST00000566491 ATAD2BQ9ULI0 1458 aa23.07■■□□□ 1.28
RPL4-211ENST00000566491 HMGXB3Q12766 1538 aa23.03■■□□□ 1.28
RPL4-211ENST00000566491 TOP2AP11388 1531 aaKnown RBP22.95■■□□□ 1.26
RPL4-211ENST00000566491 NCAPD3P42695 1498 aa22.95■■□□□ 1.26
RPL4-211ENST00000566491 BAZ1BQ9UIG0 1483 aaKnown RBP22.9■■□□□ 1.26
RPL4-211ENST00000566491 DNAJC5BQ9UF47 199 aa22.82■■□□□ 1.24
RPL4-211ENST00000566491 SUPT5HO00267 1087 aaKnown RBP22.74■■□□□ 1.23
RPL4-211ENST00000566491 CCDC88BA6NC98 1476 aa22.57■■□□□ 1.2
RPL4-211ENST00000566491 PRDM2Q13029 1718 aa22.55■■□□□ 1.2
RPL4-211ENST00000566491 LAMC3Q9Y6N6 1575 aa22.37■■□□□ 1.17
RPL4-211ENST00000566491 CFTRP13569 1480 aa22.32■■□□□ 1.16
RPL4-211ENST00000566491 NESP48681 1621 aa22.29■■□□□ 1.16
RPL4-211ENST00000566491 KIF21AQ7Z4S6 1674 aa22.24■■□□□ 1.15
RPL4-211ENST00000566491 CADPSQ9ULU8 1353 aa22.24■■□□□ 1.15
RPL4-211ENST00000566491 FANCD2Q9BXW9 1451 aa22.06■■□□□ 1.12
RPL4-211ENST00000566491 THOC2Q8NI27 1593 aaKnown RBP22.02■■□□□ 1.12
RPL4-211ENST00000566491 PDS5BQ9NTI5 1447 aa22.01■■□□□ 1.11
RPL4-211ENST00000566491 ABCC8Q09428 1581 aa22■■□□□ 1.11
RPL4-211ENST00000566491 CEP164Q9UPV0 1460 aa22■■□□□ 1.11
RPL4-211ENST00000566491 BIVM-ERCC5R4GMW8 1640 aa21.96■■□□□ 1.11
RPL4-211ENST00000566491 SYNJ1O43426 1573 aa21.93■■□□□ 1.1
RPL4-211ENST00000566491 DNMBPQ6XZF7 1577 aa21.9■■□□□ 1.1
RPL4-211ENST00000566491 CUX1P39880 1505 aa21.9■■□□□ 1.1
RPL4-211ENST00000566491 TOP2BQ02880 1626 aa21.88■■□□□ 1.09
RPL4-211ENST00000566491 WDR62O43379 1518 aa21.88■■□□□ 1.09
RPL4-211ENST00000566491 URB2Q14146 1524 aaKnown RBP21.88■■□□□ 1.09
RPL4-211ENST00000566491 ERCC6Q03468 1493 aa21.88■■□□□ 1.09
RPL4-211ENST00000566491 MRC2Q9UBG0 1479 aa21.87■■□□□ 1.09
RPL4-211ENST00000566491 WRNQ14191 1432 aaPredicted RBP eCLIP21.82■■□□□ 1.08
RPL4-211ENST00000566491 TOPBP1Q92547 1522 aa21.82■■□□□ 1.08
RPL4-211ENST00000566491 WDR97A6NE52 1622 aa21.75■■□□□ 1.07
RPL4-211ENST00000566491 CHIC1Q5VXU3 224 aa21.69■■□□□ 1.06
RPL4-211ENST00000566491 FGD5Q6ZNL6 1462 aa21.68■■□□□ 1.06
RPL4-211ENST00000566491 POLA1P09884 1462 aaPredicted RBP21.66■■□□□ 1.06
RPL4-211ENST00000566491 TARBP1Q13395 1621 aaKnown RBP21.66■■□□□ 1.06
RPL4-211ENST00000566491 CUX2O14529 1486 aa21.61■■□□□ 1.05
RPL4-211ENST00000566491 ABCA5Q8WWZ7 1642 aa21.53■■□□□ 1.04
RPL4-211ENST00000566491 ABCA10Q8WWZ4 1543 aa21.51■■□□□ 1.03
RPL4-211ENST00000566491 RAD54L2Q9Y4B4 1467 aa21.51■■□□□ 1.03
RPL4-211ENST00000566491 PBRM1Q86U86 1689 aa21.48■■□□□ 1.03
RPL4-211ENST00000566491 IFT140Q96RY7 1462 aa21.48■■□□□ 1.03
RPL4-211ENST00000566491 EIF4G3O43432 1585 aaKnown RBP21.48■■□□□ 1.03
RPL4-211ENST00000566491 TRIM41Q8WV44 630 aa21.44■■□□□ 1.02
RPL4-211ENST00000566491 SOGA1O94964 1423 aa21.44■■□□□ 1.02
RPL4-211ENST00000566491 ZNF608Q9ULD9 1512 aaPredicted RBP21.39■■□□□ 1.01
RPL4-211ENST00000566491 RUSC2Q8N2Y8 1516 aa21.34■■□□□ 1.01
RPL4-211ENST00000566491 CUL7Q14999 1698 aa21.28■■□□□ 1
RPL4-211ENST00000566491 ERICH3Q5RHP9 1530 aa21.28■■□□□ 1
RPL4-211ENST00000566491 KIF27Q86VH2 1401 aa21.28■■□□□ 1
RPL4-211ENST00000566491 GAPVD1Q14C86 1478 aa21.27■■□□□ 1
RPL4-211ENST00000566491 ADAMTS12P58397 1594 aa21.26■□□□□ 0.99
RPL4-211ENST00000566491 EEA1Q15075 1411 aa21.25■□□□□ 0.99
RPL4-211ENST00000566491 AQRO60306 1485 aaKnown RBP eCLIP21.25■□□□□ 0.993e-11■■■■■ 40.7
RPL4-211ENST00000566491 TDRD9Q8NDG6 1382 aaKnown RBP21.23■□□□□ 0.99
RPL4-211ENST00000566491 GRIN2BQ13224 1484 aa21.2■□□□□ 0.98
RPL4-211ENST00000566491 KIF21BO75037 1637 aa21.18■□□□□ 0.98
RPL4-211ENST00000566491 CHD1O14646 1710 aa21.17■□□□□ 0.98
RPL4-211ENST00000566491 SNAPC4Q5SXM2 1469 aa21.15■□□□□ 0.98
RPL4-211ENST00000566491 MAGI1Q96QZ7 1491 aaPredicted RBP21.14■□□□□ 0.98
RPL4-211ENST00000566491 PRXQ9BXM0 1461 aa21.11■□□□□ 0.97
RPL4-211ENST00000566491 IGF1RP08069 1367 aa21.1■□□□□ 0.97
RPL4-211ENST00000566491 AEBP2Q6ZN18 517 aaPredicted RBP21.09■□□□□ 0.97
RPL4-211ENST00000566491 CTTNBP2Q8WZ74 1663 aa21.06■□□□□ 0.96
RPL4-211ENST00000566491 SYNJ2O15056 1496 aa21.03■□□□□ 0.96
RPL4-211ENST00000566491 FHAD1B1AJZ9 1412 aa21.03■□□□□ 0.96
RPL4-211ENST00000566491 RAPGEF2Q9Y4G8 1499 aa21■□□□□ 0.95
RPL4-211ENST00000566491 FAM9AQ8IZU1 332 aaPredicted RBP20.99■□□□□ 0.95
RPL4-211ENST00000566491 GRIN2AQ12879 1464 aa20.99■□□□□ 0.95
RPL4-211ENST00000566491 CSRNP3Q8WYN3 585 aa20.98■□□□□ 0.95
RPL4-211ENST00000566491 CARMIL1Q5VZK9 1371 aa20.97■□□□□ 0.95
RPL4-211ENST00000566491 CEP170Q5SW79 1584 aa20.96■□□□□ 0.95
RPL4-211ENST00000566491 GOLGA3Q08378 1498 aa20.95■□□□□ 0.94
RPL4-211ENST00000566491 NUP160Q12769 1436 aa20.87■□□□□ 0.93
RPL4-211ENST00000566491 CLASP1Q7Z460 1538 aa20.86■□□□□ 0.93
RPL4-211ENST00000566491 IQGAP2Q13576 1575 aa20.82■□□□□ 0.92
RPL4-211ENST00000566491 SHROOM2Q13796 1616 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms