Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.69■□□□□ 0.26
EPHA4P54764 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
EPHA4P54764 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
EPHA4P54764 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
EPHA4P54764 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.69■□□□□ 0.26
EPHA4P54764 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.69■□□□□ 0.26
EPHA4P54764 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
EPHA4P54764 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
EPHA4P54764 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
EPHA4P54764 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
EPHA4P54764 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
EPHA4P54764 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
EPHA4P54764 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
EPHA4P54764 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.69■□□□□ 0.26
EPHA4P54764 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
EPHA4P54764 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
EPHA4P54764 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
EPHA4P54764 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.68■□□□□ 0.26
EPHA4P54764 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
EPHA4P54764 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
EPHA4P54764 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
EPHA4P54764 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
EPHA4P54764 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
EPHA4P54764 RPSAP43-201ENST00000402237 625 ntBASIC16.68■□□□□ 0.26
EPHA4P54764 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.68■□□□□ 0.26
EPHA4P54764 KRT18P2-201ENST00000447938 1258 ntBASIC16.68■□□□□ 0.26
EPHA4P54764 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.68■□□□□ 0.26
EPHA4P54764 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.68■□□□□ 0.26
EPHA4P54764 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.68■□□□□ 0.26
EPHA4P54764 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.68■□□□□ 0.26
EPHA4P54764 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.68■□□□□ 0.26
EPHA4P54764 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.68■□□□□ 0.26
EPHA4P54764 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.68■□□□□ 0.26
EPHA4P54764 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
EPHA4P54764 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.68■□□□□ 0.26
EPHA4P54764 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
EPHA4P54764 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
EPHA4P54764 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.68■□□□□ 0.26
EPHA4P54764 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
EPHA4P54764 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.68■□□□□ 0.26
EPHA4P54764 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.68■□□□□ 0.26
EPHA4P54764 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
EPHA4P54764 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
EPHA4P54764 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
EPHA4P54764 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
EPHA4P54764 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
EPHA4P54764 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHA4P54764 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHA4P54764 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.67■□□□□ 0.26
EPHA4P54764 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.67■□□□□ 0.26
EPHA4P54764 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHA4P54764 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
EPHA4P54764 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHA4P54764 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
EPHA4P54764 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
EPHA4P54764 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.67■□□□□ 0.26
EPHA4P54764 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
EPHA4P54764 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHA4P54764 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
EPHA4P54764 AC023274.1-201ENST00000418278 595 ntBASIC16.67■□□□□ 0.26
EPHA4P54764 MCCD1P2-201ENST00000423228 335 ntBASIC16.67■□□□□ 0.26
EPHA4P54764 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
EPHA4P54764 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.67■□□□□ 0.26
EPHA4P54764 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.67■□□□□ 0.26
EPHA4P54764 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
EPHA4P54764 AC010327.4-202ENST00000591484 748 ntBASIC16.67■□□□□ 0.26
EPHA4P54764 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.67■□□□□ 0.26
EPHA4P54764 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.67■□□□□ 0.26
EPHA4P54764 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.67■□□□□ 0.26
EPHA4P54764 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHA4P54764 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHA4P54764 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHA4P54764 PI4KAP1-204ENST00000612579 1703 ntBASIC16.67■□□□□ 0.26
EPHA4P54764 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHA4P54764 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
EPHA4P54764 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHA4P54764 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
EPHA4P54764 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHA4P54764 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHA4P54764 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
EPHA4P54764 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.66■□□□□ 0.26
EPHA4P54764 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EPHA4P54764 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.66■□□□□ 0.26
EPHA4P54764 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.66■□□□□ 0.26
EPHA4P54764 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.66■□□□□ 0.26
EPHA4P54764 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
EPHA4P54764 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EPHA4P54764 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
EPHA4P54764 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
EPHA4P54764 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
EPHA4P54764 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
EPHA4P54764 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
EPHA4P54764 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.66■□□□□ 0.26
EPHA4P54764 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.66■□□□□ 0.26
EPHA4P54764 AC096734.2-201ENST00000562054 433 ntBASIC16.66■□□□□ 0.26
EPHA4P54764 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.66■□□□□ 0.26
EPHA4P54764 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
EPHA4P54764 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EPHA4P54764 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.66■□□□□ 0.26
EPHA4P54764 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms