Protein–RNA interactions for Protein: O95407

TNFRSF6B, Tumor necrosis factor receptor superfamily member 6B, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6BO95407 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TNFRSF6BO95407 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC12.65□□□□□ -0.38
TNFRSF6BO95407 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
TNFRSF6BO95407 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
TNFRSF6BO95407 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.39
TNFRSF6BO95407 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
TNFRSF6BO95407 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
TNFRSF6BO95407 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TNFRSF6BO95407 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TNFRSF6BO95407 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC12.64□□□□□ -0.39
TNFRSF6BO95407 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TNFRSF6BO95407 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TNFRSF6BO95407 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
TNFRSF6BO95407 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TNFRSF6BO95407 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TNFRSF6BO95407 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TNFRSF6BO95407 AC092053.1-201ENST00000605787 1936 ntBASIC12.64□□□□□ -0.39
TNFRSF6BO95407 AC068418.2-201ENST00000577309 3703 ntBASIC12.64□□□□□ -0.39
TNFRSF6BO95407 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TNFRSF6BO95407 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TNFRSF6BO95407 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TNFRSF6BO95407 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TNFRSF6BO95407 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TNFRSF6BO95407 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TNFRSF6BO95407 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC12.64□□□□□ -0.39
TNFRSF6BO95407 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC12.64□□□□□ -0.39
TNFRSF6BO95407 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TNFRSF6BO95407 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TNFRSF6BO95407 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TNFRSF6BO95407 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TNFRSF6BO95407 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TNFRSF6BO95407 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC12.64□□□□□ -0.39
TNFRSF6BO95407 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC12.64□□□□□ -0.39
TNFRSF6BO95407 AL355355.2-201ENST00000442321 338 ntBASIC12.64□□□□□ -0.39
TNFRSF6BO95407 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC12.64□□□□□ -0.39
TNFRSF6BO95407 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC12.64□□□□□ -0.39
TNFRSF6BO95407 REEP1-209ENST00000541910 969 ntTSL 2 BASIC12.64□□□□□ -0.39
TNFRSF6BO95407 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC12.64□□□□□ -0.39
TNFRSF6BO95407 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TNFRSF6BO95407 WWOX-216ENST00000569818 525 ntBASIC12.64□□□□□ -0.39
TNFRSF6BO95407 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC12.64□□□□□ -0.39
TNFRSF6BO95407 AF186192.3-201ENST00000583427 947 ntBASIC12.64□□□□□ -0.39
TNFRSF6BO95407 CYGB-204ENST00000589342 815 ntTSL 3 BASIC12.64□□□□□ -0.39
TNFRSF6BO95407 AC010240.3-201ENST00000607688 395 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms