Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH20Q9HBT6 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CDH20Q9HBT6 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH20Q9HBT6 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 KLF4P1-201ENST00000412782 1185 ntBASIC15.22■□□□□ 0.03
CDH20Q9HBT6 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 AL450487.1-201ENST00000426799 995 ntBASIC15.22■□□□□ 0.03
CDH20Q9HBT6 ABCD1P5-201ENST00000445663 754 ntBASIC15.22■□□□□ 0.03
CDH20Q9HBT6 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 AC019129.2-201ENST00000609837 1235 ntBASIC15.22■□□□□ 0.03
CDH20Q9HBT6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 AC073592.5-201ENST00000624854 528 ntBASIC15.22■□□□□ 0.03
CDH20Q9HBT6 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 KRT8P10-201ENST00000450021 1447 ntBASIC15.22■□□□□ 0.03
CDH20Q9HBT6 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH20Q9HBT6 FER1L4-210ENST00000615531 5998 ntBASIC15.21■□□□□ 0.03
CDH20Q9HBT6 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH20Q9HBT6 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH20Q9HBT6 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH20Q9HBT6 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH20Q9HBT6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH20Q9HBT6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH20Q9HBT6 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH20Q9HBT6 AC012313.1-201ENST00000593393 3059 ntBASIC15.21■□□□□ 0.03
CDH20Q9HBT6 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH20Q9HBT6 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH20Q9HBT6 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH20Q9HBT6 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CDH20Q9HBT6 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.21■□□□□ 0.03
CDH20Q9HBT6 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH20Q9HBT6 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH20Q9HBT6 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CDH20Q9HBT6 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CDH20Q9HBT6 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH20Q9HBT6 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.21■□□□□ 0.03
CDH20Q9HBT6 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CDH20Q9HBT6 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.21■□□□□ 0.03
CDH20Q9HBT6 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH20Q9HBT6 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH20Q9HBT6 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH20Q9HBT6 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH20Q9HBT6 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.21■□□□□ 0.03
CDH20Q9HBT6 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH20Q9HBT6 STK19B-204ENST00000512515 211 ntBASIC15.21■□□□□ 0.03
CDH20Q9HBT6 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.21■□□□□ 0.03
CDH20Q9HBT6 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH20Q9HBT6 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH20Q9HBT6 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CDH20Q9HBT6 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH20Q9HBT6 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH20Q9HBT6 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CDH20Q9HBT6 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH20Q9HBT6 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.21■□□□□ 0.03
CDH20Q9HBT6 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH20Q9HBT6 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms