Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
AP3S2P59780 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S2P59780 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S2P59780 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.97□□□□□ -0.01
AP3S2P59780 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S2P59780 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.97□□□□□ -0.01
AP3S2P59780 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S2P59780 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S2P59780 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC14.97□□□□□ -0.01
AP3S2P59780 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S2P59780 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S2P59780 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S2P59780 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S2P59780 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S2P59780 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.97□□□□□ -0.01
AP3S2P59780 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S2P59780 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S2P59780 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S2P59780 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
AP3S2P59780 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.96□□□□□ -0.01
AP3S2P59780 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP3S2P59780 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
AP3S2P59780 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.96□□□□□ -0.01
AP3S2P59780 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP3S2P59780 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP3S2P59780 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
AP3S2P59780 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP3S2P59780 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
AP3S2P59780 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP3S2P59780 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
AP3S2P59780 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP3S2P59780 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP3S2P59780 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
AP3S2P59780 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
AP3S2P59780 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP3S2P59780 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
AP3S2P59780 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
AP3S2P59780 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
AP3S2P59780 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
AP3S2P59780 AL353807.1-201ENST00000427475 662 ntBASIC14.96□□□□□ -0.01
AP3S2P59780 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
AP3S2P59780 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
AP3S2P59780 AC006970.2-201ENST00000450065 779 ntBASIC14.96□□□□□ -0.01
AP3S2P59780 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC14.96□□□□□ -0.01
AP3S2P59780 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.96□□□□□ -0.01
AP3S2P59780 AL138781.1-201ENST00000566567 1274 ntBASIC14.96□□□□□ -0.01
AP3S2P59780 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
AP3S2P59780 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP3S2P59780 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
AP3S2P59780 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
AP3S2P59780 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP3S2P59780 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP3S2P59780 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP3S2P59780 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP3S2P59780 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.96□□□□□ -0.01
AP3S2P59780 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP3S2P59780 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP3S2P59780 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP3S2P59780 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP3S2P59780 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
AP3S2P59780 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
AP3S2P59780 BX276092.7-203ENST00000637198 1536 ntBASIC14.96□□□□□ -0.02
AP3S2P59780 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
AP3S2P59780 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.02
AP3S2P59780 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.96□□□□□ -0.02
AP3S2P59780 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
AP3S2P59780 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.02
AP3S2P59780 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
AP3S2P59780 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
AP3S2P59780 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S2P59780 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.95□□□□□ -0.02
AP3S2P59780 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S2P59780 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.95□□□□□ -0.02
AP3S2P59780 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.95□□□□□ -0.02
AP3S2P59780 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S2P59780 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.95□□□□□ -0.02
AP3S2P59780 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S2P59780 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S2P59780 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S2P59780 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S2P59780 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S2P59780 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S2P59780 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S2P59780 KRT8P9-201ENST00000558927 1449 ntBASIC14.95□□□□□ -0.02
AP3S2P59780 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.95□□□□□ -0.02
AP3S2P59780 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S2P59780 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AP3S2P59780 CROCCP5-201ENST00000436658 830 ntBASIC14.95□□□□□ -0.02
AP3S2P59780 AL355355.2-201ENST00000442321 338 ntBASIC14.95□□□□□ -0.02
AP3S2P59780 TSPY6P-201ENST00000448518 926 ntBASIC14.95□□□□□ -0.02
AP3S2P59780 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC14.95□□□□□ -0.02
AP3S2P59780 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC14.95□□□□□ -0.02
AP3S2P59780 AC104390.1-201ENST00000555663 520 ntBASIC14.95□□□□□ -0.02
AP3S2P59780 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC14.95□□□□□ -0.02
AP3S2P59780 AP000692.2-201ENST00000608391 879 ntBASIC14.95□□□□□ -0.02
AP3S2P59780 AC069544.1-201ENST00000609399 999 ntBASIC14.95□□□□□ -0.02
AP3S2P59780 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
AP3S2P59780 MIR6786-201ENST00000616843 113 ntBASIC14.95□□□□□ -0.02
AP3S2P59780 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
AP3S2P59780 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms