Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.63□□□□□ -0.07
CD74P04233 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD74P04233 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.63□□□□□ -0.07
CD74P04233 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.63□□□□□ -0.07
CD74P04233 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CD74P04233 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD74P04233 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD74P04233 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD74P04233 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
CD74P04233 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD74P04233 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.63□□□□□ -0.07
CD74P04233 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CD74P04233 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14.63□□□□□ -0.07
CD74P04233 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.63□□□□□ -0.07
CD74P04233 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC14.63□□□□□ -0.07
CD74P04233 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.63□□□□□ -0.07
CD74P04233 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CD74P04233 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CD74P04233 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD74P04233 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.63□□□□□ -0.07
CD74P04233 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.63□□□□□ -0.07
CD74P04233 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD74P04233 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.63□□□□□ -0.07
CD74P04233 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD74P04233 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD74P04233 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD74P04233 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD74P04233 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.63□□□□□ -0.07
CD74P04233 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD74P04233 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD74P04233 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD74P04233 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CD74P04233 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
CD74P04233 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CD74P04233 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC14.63□□□□□ -0.07
CD74P04233 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CD74P04233 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD74P04233 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD74P04233 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CD74P04233 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD74P04233 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CD74P04233 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.62□□□□□ -0.07
CD74P04233 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.62□□□□□ -0.07
CD74P04233 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CD74P04233 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
CD74P04233 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.62□□□□□ -0.07
CD74P04233 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD74P04233 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CD74P04233 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD74P04233 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD74P04233 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD74P04233 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.62□□□□□ -0.07
CD74P04233 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CD74P04233 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD74P04233 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD74P04233 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD74P04233 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD74P04233 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC14.62□□□□□ -0.07
CD74P04233 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CD74P04233 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD74P04233 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD74P04233 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.62□□□□□ -0.07
CD74P04233 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.62□□□□□ -0.07
CD74P04233 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC14.62□□□□□ -0.07
CD74P04233 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC14.62□□□□□ -0.07
CD74P04233 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CD74P04233 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CD74P04233 AL359736.2-201ENST00000621992 437 ntBASIC14.62□□□□□ -0.07
CD74P04233 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CD74P04233 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD74P04233 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CD74P04233 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD74P04233 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CD74P04233 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.62□□□□□ -0.07
CD74P04233 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD74P04233 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.62□□□□□ -0.07
CD74P04233 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD74P04233 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.62□□□□□ -0.07
CD74P04233 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CD74P04233 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CD74P04233 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CD74P04233 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.62□□□□□ -0.07
CD74P04233 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD74P04233 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.61□□□□□ -0.07
CD74P04233 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.61□□□□□ -0.07
CD74P04233 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD74P04233 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD74P04233 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CD74P04233 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.61□□□□□ -0.07
CD74P04233 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD74P04233 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.61□□□□□ -0.07
CD74P04233 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD74P04233 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD74P04233 ABHD17AP1-201ENST00000358206 933 ntBASIC14.61□□□□□ -0.07
CD74P04233 GAD2-202ENST00000376248 680 ntTSL 5 BASIC14.61□□□□□ -0.07
CD74P04233 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD74P04233 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.61□□□□□ -0.07
CD74P04233 AC096633.1-201ENST00000422446 749 ntBASIC14.61□□□□□ -0.07
CD74P04233 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.61□□□□□ -0.07
CD74P04233 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms