Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 BX276092.7-203ENST00000637198 1536 ntBASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 POLD4-207ENST00000531239 584 ntTSL 2 BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 MAL2-202ENST00000531508 892 ntTSL 3 BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 TK1-204ENST00000590430 683 ntTSL 3 BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 AL596442.2-201ENST00000610240 980 ntBASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 MIR1199-201ENST00000621445 119 ntBASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 AC005593.1-201ENST00000624894 515 ntBASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 AC134684.3-201ENST00000641758 218 ntBASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
KRTAP4-3Q9BYR4 CROCCP2-202ENST00000412962 2773 ntBASIC5.9□□□□□ -1.47
KRTAP4-3Q9BYR4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
KRTAP4-3Q9BYR4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
KRTAP4-3Q9BYR4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
KRTAP4-3Q9BYR4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC5.9□□□□□ -1.47
KRTAP4-3Q9BYR4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
KRTAP4-3Q9BYR4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC5.9□□□□□ -1.47
KRTAP4-3Q9BYR4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
KRTAP4-3Q9BYR4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC5.9□□□□□ -1.47
KRTAP4-3Q9BYR4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
KRTAP4-3Q9BYR4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.47
KRTAP4-3Q9BYR4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
KRTAP4-3Q9BYR4 LYSMD4-203ENST00000378904 2122 ntBASIC5.9□□□□□ -1.47
KRTAP4-3Q9BYR4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
KRTAP4-3Q9BYR4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
KRTAP4-3Q9BYR4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
KRTAP4-3Q9BYR4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
KRTAP4-3Q9BYR4 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC5.9□□□□□ -1.47
KRTAP4-3Q9BYR4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
KRTAP4-3Q9BYR4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
KRTAP4-3Q9BYR4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC5.9□□□□□ -1.47
KRTAP4-3Q9BYR4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
KRTAP4-3Q9BYR4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
KRTAP4-3Q9BYR4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC5.9□□□□□ -1.47
KRTAP4-3Q9BYR4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms