Protein–RNA interactions for Protein: P63272

SUPT4H1, Transcription elongation factor SPT4, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1P63272 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SUPT4H1P63272 PAUPAR-201ENST00000630360 2965 ntBASIC14.37□□□□□ -0.11
SUPT4H1P63272 AL157888.1-201ENST00000631930 593 ntBASIC14.37□□□□□ -0.11
SUPT4H1P63272 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.37□□□□□ -0.11
SUPT4H1P63272 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SUPT4H1P63272 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SUPT4H1P63272 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.37□□□□□ -0.11
SUPT4H1P63272 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SUPT4H1P63272 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SUPT4H1P63272 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SUPT4H1P63272 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
SUPT4H1P63272 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.37□□□□□ -0.11
SUPT4H1P63272 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.37□□□□□ -0.11
SUPT4H1P63272 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SUPT4H1P63272 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC14.37□□□□□ -0.11
SUPT4H1P63272 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
SUPT4H1P63272 KRT89P-201ENST00000620027 1478 ntBASIC14.37□□□□□ -0.11
SUPT4H1P63272 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SUPT4H1P63272 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SUPT4H1P63272 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SUPT4H1P63272 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SUPT4H1P63272 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SUPT4H1P63272 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
SUPT4H1P63272 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.36□□□□□ -0.11
SUPT4H1P63272 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.36□□□□□ -0.11
SUPT4H1P63272 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SUPT4H1P63272 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.36□□□□□ -0.11
SUPT4H1P63272 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SUPT4H1P63272 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SUPT4H1P63272 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SUPT4H1P63272 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.36□□□□□ -0.11
SUPT4H1P63272 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SUPT4H1P63272 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SUPT4H1P63272 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SUPT4H1P63272 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.36□□□□□ -0.11
SUPT4H1P63272 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
SUPT4H1P63272 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SUPT4H1P63272 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SUPT4H1P63272 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SUPT4H1P63272 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SUPT4H1P63272 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SUPT4H1P63272 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.36□□□□□ -0.11
SUPT4H1P63272 AC009947.2-201ENST00000444014 672 ntBASIC14.36□□□□□ -0.11
SUPT4H1P63272 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.36□□□□□ -0.11
SUPT4H1P63272 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.36□□□□□ -0.11
SUPT4H1P63272 PENK-204ENST00000518770 863 ntTSL 2 BASIC14.36□□□□□ -0.11
SUPT4H1P63272 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC14.36□□□□□ -0.11
SUPT4H1P63272 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC14.36□□□□□ -0.11
SUPT4H1P63272 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC14.36□□□□□ -0.11
SUPT4H1P63272 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.36□□□□□ -0.11
SUPT4H1P63272 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SUPT4H1P63272 AC009154.2-201ENST00000621177 724 ntBASIC14.36□□□□□ -0.11
SUPT4H1P63272 AC010653.2-201ENST00000623505 997 ntBASIC14.36□□□□□ -0.11
SUPT4H1P63272 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SUPT4H1P63272 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.36□□□□□ -0.11
SUPT4H1P63272 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
SUPT4H1P63272 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.36□□□□□ -0.11
SUPT4H1P63272 AL513477.1-201ENST00000602865 2407 ntBASIC14.36□□□□□ -0.11
SUPT4H1P63272 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SUPT4H1P63272 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SUPT4H1P63272 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SUPT4H1P63272 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SUPT4H1P63272 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SUPT4H1P63272 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SUPT4H1P63272 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SUPT4H1P63272 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SUPT4H1P63272 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SUPT4H1P63272 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SUPT4H1P63272 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SUPT4H1P63272 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SUPT4H1P63272 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
SUPT4H1P63272 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SUPT4H1P63272 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SUPT4H1P63272 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SUPT4H1P63272 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SUPT4H1P63272 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SUPT4H1P63272 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SUPT4H1P63272 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SUPT4H1P63272 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SUPT4H1P63272 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SUPT4H1P63272 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SUPT4H1P63272 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SUPT4H1P63272 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SUPT4H1P63272 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SUPT4H1P63272 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SUPT4H1P63272 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SUPT4H1P63272 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SUPT4H1P63272 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.35□□□□□ -0.11
SUPT4H1P63272 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SUPT4H1P63272 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SUPT4H1P63272 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SUPT4H1P63272 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SUPT4H1P63272 AC024909.3-201ENST00000611513 2257 ntBASIC14.35□□□□□ -0.11
SUPT4H1P63272 HYMAI-201ENST00000635591 3347 ntBASIC14.35□□□□□ -0.11
SUPT4H1P63272 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SUPT4H1P63272 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.35□□□□□ -0.11
SUPT4H1P63272 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SUPT4H1P63272 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SUPT4H1P63272 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.35□□□□□ -0.11
SUPT4H1P63272 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms