Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP3S2P59780 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP3S2P59780 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP3S2P59780 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
AP3S2P59780 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP3S2P59780 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
AP3S2P59780 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
AP3S2P59780 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.99□□□□□ -0.01
AP3S2P59780 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP3S2P59780 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.99□□□□□ -0.01
AP3S2P59780 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP3S2P59780 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
AP3S2P59780 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.99□□□□□ -0.01
AP3S2P59780 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
AP3S2P59780 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.99□□□□□ -0.01
AP3S2P59780 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.99□□□□□ -0.01
AP3S2P59780 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP3S2P59780 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP3S2P59780 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP3S2P59780 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC14.99□□□□□ -0.01
AP3S2P59780 KRASP1-201ENST00000407852 552 ntBASIC14.99□□□□□ -0.01
AP3S2P59780 CDCA4P2-201ENST00000441182 718 ntBASIC14.99□□□□□ -0.01
AP3S2P59780 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.99□□□□□ -0.01
AP3S2P59780 AC008040.2-201ENST00000461049 708 ntBASIC14.99□□□□□ -0.01
AP3S2P59780 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC14.99□□□□□ -0.01
AP3S2P59780 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC14.99□□□□□ -0.01
AP3S2P59780 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
AP3S2P59780 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.99□□□□□ -0.01
AP3S2P59780 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP3S2P59780 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.99□□□□□ -0.01
AP3S2P59780 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
AP3S2P59780 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP3S2P59780 AC105917.1-201ENST00000506637 2539 ntBASIC14.99□□□□□ -0.01
AP3S2P59780 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC14.99□□□□□ -0.01
AP3S2P59780 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
AP3S2P59780 AC046185.3-201ENST00000623228 1824 ntBASIC14.99□□□□□ -0.01
AP3S2P59780 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP3S2P59780 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
AP3S2P59780 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP3S2P59780 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP3S2P59780 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
AP3S2P59780 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC14.98□□□□□ -0.01
AP3S2P59780 AC078925.2-201ENST00000624013 1973 ntBASIC14.98□□□□□ -0.01
AP3S2P59780 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
AP3S2P59780 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP3S2P59780 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
AP3S2P59780 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
AP3S2P59780 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP3S2P59780 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP3S2P59780 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP3S2P59780 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.98□□□□□ -0.01
AP3S2P59780 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP3S2P59780 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
AP3S2P59780 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP3S2P59780 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
AP3S2P59780 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.98□□□□□ -0.01
AP3S2P59780 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC14.98□□□□□ -0.01
AP3S2P59780 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
AP3S2P59780 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC14.98□□□□□ -0.01
AP3S2P59780 KRT17P3-201ENST00000420566 1262 ntBASIC14.98□□□□□ -0.01
AP3S2P59780 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC14.98□□□□□ -0.01
AP3S2P59780 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
AP3S2P59780 RPS2P4-201ENST00000476944 856 ntBASIC14.98□□□□□ -0.01
AP3S2P59780 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
AP3S2P59780 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC14.98□□□□□ -0.01
AP3S2P59780 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP3S2P59780 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC14.98□□□□□ -0.01
AP3S2P59780 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP3S2P59780 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP3S2P59780 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
AP3S2P59780 HYMAI-201ENST00000635591 3347 ntBASIC14.98□□□□□ -0.01
AP3S2P59780 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.98□□□□□ -0.01
AP3S2P59780 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
AP3S2P59780 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
AP3S2P59780 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP3S2P59780 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP3S2P59780 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
AP3S2P59780 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP3S2P59780 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S2P59780 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S2P59780 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S2P59780 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S2P59780 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S2P59780 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S2P59780 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S2P59780 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
AP3S2P59780 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S2P59780 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S2P59780 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
AP3S2P59780 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S2P59780 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S2P59780 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S2P59780 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S2P59780 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S2P59780 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.97□□□□□ -0.01
AP3S2P59780 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
AP3S2P59780 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
AP3S2P59780 CA15P1-201ENST00000481698 905 ntBASIC14.97□□□□□ -0.01
AP3S2P59780 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S2P59780 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms