Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 RNF216P1-203ENST00000404404 2427 ntBASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 AC005104.2-201ENST00000427818 678 ntBASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 FAM87A-204ENST00000613235 858 ntBASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 AC010947.1-201ENST00000623454 693 ntBASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 LINC02199-201ENST00000506655 2702 ntBASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 AC092171.3-201ENST00000610122 2651 ntBASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 AC112698.1-201ENST00000510299 916 ntBASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 AC008550.1-201ENST00000511500 884 ntBASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 AC004263.2-201ENST00000617183 678 ntBASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 GLDC-219ENST00000640208 420 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 AL603756.1-201ENST00000606511 2163 ntBASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV5A0A0B4J249 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms