Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 FEM1AP3-201ENST00000403722 1741 ntBASIC16.02■□□□□ 0.16
HPS1Q92902 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
HPS1Q92902 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
HPS1Q92902 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
HPS1Q92902 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HPS1Q92902 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
HPS1Q92902 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
HPS1Q92902 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.02■□□□□ 0.16
HPS1Q92902 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
HPS1Q92902 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HPS1Q92902 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HPS1Q92902 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.02■□□□□ 0.16
HPS1Q92902 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
HPS1Q92902 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
HPS1Q92902 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
HPS1Q92902 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HPS1Q92902 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
HPS1Q92902 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.02■□□□□ 0.16
HPS1Q92902 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HPS1Q92902 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.02■□□□□ 0.16
HPS1Q92902 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HPS1Q92902 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HPS1Q92902 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HPS1Q92902 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HPS1Q92902 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
HPS1Q92902 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HPS1Q92902 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HPS1Q92902 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
HPS1Q92902 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HPS1Q92902 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.02■□□□□ 0.15
HPS1Q92902 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HPS1Q92902 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HPS1Q92902 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
HPS1Q92902 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.02■□□□□ 0.15
HPS1Q92902 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HPS1Q92902 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
HPS1Q92902 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
HPS1Q92902 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HPS1Q92902 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HPS1Q92902 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.01■□□□□ 0.15
HPS1Q92902 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.01■□□□□ 0.15
HPS1Q92902 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
HPS1Q92902 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HPS1Q92902 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HPS1Q92902 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HPS1Q92902 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
HPS1Q92902 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HPS1Q92902 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
HPS1Q92902 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HPS1Q92902 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HPS1Q92902 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.01■□□□□ 0.15
HPS1Q92902 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HPS1Q92902 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
HPS1Q92902 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
HPS1Q92902 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HPS1Q92902 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
HPS1Q92902 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HPS1Q92902 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HPS1Q92902 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HPS1Q92902 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HPS1Q92902 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HPS1Q92902 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HPS1Q92902 FAM8A6P-201ENST00000407496 1135 ntBASIC16.01■□□□□ 0.15
HPS1Q92902 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.01■□□□□ 0.15
HPS1Q92902 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.01■□□□□ 0.15
HPS1Q92902 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.01■□□□□ 0.15
HPS1Q92902 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.01■□□□□ 0.15
HPS1Q92902 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.01■□□□□ 0.15
HPS1Q92902 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.01■□□□□ 0.15
HPS1Q92902 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.01■□□□□ 0.15
HPS1Q92902 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HPS1Q92902 AC091076.1-201ENST00000610741 619 ntBASIC16.01■□□□□ 0.15
HPS1Q92902 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HPS1Q92902 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HPS1Q92902 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.01■□□□□ 0.15
HPS1Q92902 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HPS1Q92902 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HPS1Q92902 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HPS1Q92902 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
HPS1Q92902 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.01■□□□□ 0.15
HPS1Q92902 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HPS1Q92902 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HPS1Q92902 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
HPS1Q92902 LINC02228-204ENST00000642115 2962 ntBASIC16.01■□□□□ 0.15
HPS1Q92902 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HPS1Q92902 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.01■□□□□ 0.15
HPS1Q92902 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
HPS1Q92902 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.01■□□□□ 0.15
HPS1Q92902 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
HPS1Q92902 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
HPS1Q92902 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HPS1Q92902 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
HPS1Q92902 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16■□□□□ 0.15
HPS1Q92902 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HPS1Q92902 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16■□□□□ 0.15
HPS1Q92902 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HPS1Q92902 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16■□□□□ 0.15
HPS1Q92902 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HPS1Q92902 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
HPS1Q92902 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms