Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
LTN1O94822 CD99-202ENST00000381180 530 ntTSL 2 BASIC22.9■■□□□ 1.26
LTN1O94822 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
LTN1O94822 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC22.9■■□□□ 1.26
LTN1O94822 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
LTN1O94822 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
LTN1O94822 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC22.9■■□□□ 1.26
LTN1O94822 AKAP8P1-201ENST00000434743 1349 ntBASIC22.9■■□□□ 1.26
LTN1O94822 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC22.9■■□□□ 1.26
LTN1O94822 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC22.9■■□□□ 1.26
LTN1O94822 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC22.9■■□□□ 1.26
LTN1O94822 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
LTN1O94822 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
LTN1O94822 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
LTN1O94822 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
LTN1O94822 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
LTN1O94822 ABALON-201ENST00000629058 1903 ntBASIC22.89■■□□□ 1.26
LTN1O94822 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.26
LTN1O94822 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
LTN1O94822 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
LTN1O94822 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
LTN1O94822 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
LTN1O94822 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
LTN1O94822 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
LTN1O94822 CCDC74BP1-201ENST00000508880 1123 ntBASIC22.89■■□□□ 1.26
LTN1O94822 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
LTN1O94822 AC092364.2-202ENST00000597012 1073 ntBASIC22.89■■□□□ 1.26
LTN1O94822 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
LTN1O94822 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
LTN1O94822 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
LTN1O94822 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC22.89■■□□□ 1.25
LTN1O94822 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
LTN1O94822 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC22.89■■□□□ 1.25
LTN1O94822 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
LTN1O94822 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.25
LTN1O94822 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC22.89■■□□□ 1.25
LTN1O94822 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC22.89■■□□□ 1.25
LTN1O94822 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC22.89■■□□□ 1.25
LTN1O94822 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
LTN1O94822 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC22.89■■□□□ 1.25
LTN1O94822 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
LTN1O94822 BSG-214ENST00000614867 960 ntTSL 3 BASIC22.89■■□□□ 1.25
LTN1O94822 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
LTN1O94822 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
LTN1O94822 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
LTN1O94822 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC22.88■■□□□ 1.25
LTN1O94822 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
LTN1O94822 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
LTN1O94822 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
LTN1O94822 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC22.88■■□□□ 1.25
LTN1O94822 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
LTN1O94822 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
LTN1O94822 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC22.88■■□□□ 1.25
LTN1O94822 GATB-205ENST00000508611 605 ntTSL 2 BASIC22.88■■□□□ 1.25
LTN1O94822 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC22.88■■□□□ 1.25
LTN1O94822 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC22.88■■□□□ 1.25
LTN1O94822 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
LTN1O94822 AC243562.1-201ENST00000560672 389 ntBASIC22.88■■□□□ 1.25
LTN1O94822 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
LTN1O94822 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
LTN1O94822 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
LTN1O94822 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
LTN1O94822 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
LTN1O94822 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
LTN1O94822 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
LTN1O94822 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC22.87■■□□□ 1.25
LTN1O94822 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
LTN1O94822 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC22.87■■□□□ 1.25
LTN1O94822 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
LTN1O94822 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
LTN1O94822 AQP6-203ENST00000551733 849 ntTSL 3 BASIC22.87■■□□□ 1.25
LTN1O94822 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC22.87■■□□□ 1.25
LTN1O94822 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC22.87■■□□□ 1.25
LTN1O94822 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC22.87■■□□□ 1.25
LTN1O94822 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
LTN1O94822 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
LTN1O94822 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
LTN1O94822 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
LTN1O94822 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC22.87■■□□□ 1.25
LTN1O94822 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
LTN1O94822 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
LTN1O94822 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC22.87■■□□□ 1.25
LTN1O94822 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
LTN1O94822 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC22.86■■□□□ 1.25
LTN1O94822 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC22.86■■□□□ 1.25
LTN1O94822 TSFM-210ENST00000550559 897 ntTSL 5 BASIC22.86■■□□□ 1.25
LTN1O94822 AC005412.3-201ENST00000580309 715 ntBASIC22.86■■□□□ 1.25
LTN1O94822 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC22.86■■□□□ 1.25
LTN1O94822 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC22.86■■□□□ 1.25
LTN1O94822 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
LTN1O94822 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
LTN1O94822 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
LTN1O94822 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC22.86■■□□□ 1.25
LTN1O94822 AL354751.1-201ENST00000412768 1863 ntBASIC22.86■■□□□ 1.25
LTN1O94822 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
LTN1O94822 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC22.86■■□□□ 1.25
LTN1O94822 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
LTN1O94822 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
LTN1O94822 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
LTN1O94822 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC22.86■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms