Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.99■□□□□ 0.31
NDE1Q9NXR1 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NDE1Q9NXR1 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.99■□□□□ 0.31
NDE1Q9NXR1 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
NDE1Q9NXR1 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
NDE1Q9NXR1 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.99■□□□□ 0.31
NDE1Q9NXR1 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.99■□□□□ 0.31
NDE1Q9NXR1 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
NDE1Q9NXR1 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NDE1Q9NXR1 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NDE1Q9NXR1 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NDE1Q9NXR1 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
NDE1Q9NXR1 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NDE1Q9NXR1 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.99■□□□□ 0.31
NDE1Q9NXR1 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
NDE1Q9NXR1 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NDE1Q9NXR1 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NDE1Q9NXR1 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.98■□□□□ 0.31
NDE1Q9NXR1 AC132872.4-202ENST00000622924 2756 ntBASIC16.98■□□□□ 0.31
NDE1Q9NXR1 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NDE1Q9NXR1 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
NDE1Q9NXR1 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NDE1Q9NXR1 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NDE1Q9NXR1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NDE1Q9NXR1 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.98■□□□□ 0.31
NDE1Q9NXR1 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
NDE1Q9NXR1 MESTP1-201ENST00000404287 994 ntBASIC16.98■□□□□ 0.31
NDE1Q9NXR1 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NDE1Q9NXR1 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.98■□□□□ 0.31
NDE1Q9NXR1 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.98■□□□□ 0.31
NDE1Q9NXR1 SLC25A1P4-201ENST00000567977 778 ntBASIC16.98■□□□□ 0.31
NDE1Q9NXR1 WWOX-216ENST00000569818 525 ntBASIC16.98■□□□□ 0.31
NDE1Q9NXR1 AF186192.3-201ENST00000583427 947 ntBASIC16.98■□□□□ 0.31
NDE1Q9NXR1 AC112497.1-201ENST00000624824 639 ntBASIC16.98■□□□□ 0.31
NDE1Q9NXR1 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
NDE1Q9NXR1 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NDE1Q9NXR1 AC007950.2-201ENST00000615045 2347 ntBASIC16.98■□□□□ 0.31
NDE1Q9NXR1 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NDE1Q9NXR1 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NDE1Q9NXR1 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NDE1Q9NXR1 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NDE1Q9NXR1 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.98■□□□□ 0.31
NDE1Q9NXR1 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
NDE1Q9NXR1 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NDE1Q9NXR1 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.97■□□□□ 0.31
NDE1Q9NXR1 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
NDE1Q9NXR1 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.97■□□□□ 0.31
NDE1Q9NXR1 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.97■□□□□ 0.31
NDE1Q9NXR1 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
NDE1Q9NXR1 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
NDE1Q9NXR1 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NDE1Q9NXR1 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
NDE1Q9NXR1 AC006449.5-201ENST00000610658 2098 ntBASIC16.97■□□□□ 0.31
NDE1Q9NXR1 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.97■□□□□ 0.31
NDE1Q9NXR1 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
NDE1Q9NXR1 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NDE1Q9NXR1 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
NDE1Q9NXR1 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NDE1Q9NXR1 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
NDE1Q9NXR1 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.97■□□□□ 0.31
NDE1Q9NXR1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.97■□□□□ 0.31
NDE1Q9NXR1 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NDE1Q9NXR1 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NDE1Q9NXR1 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
NDE1Q9NXR1 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.97■□□□□ 0.31
NDE1Q9NXR1 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NDE1Q9NXR1 AC005915.1-201ENST00000624912 2018 ntBASIC16.97■□□□□ 0.31
NDE1Q9NXR1 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NDE1Q9NXR1 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NDE1Q9NXR1 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NDE1Q9NXR1 AC022188.1-201ENST00000620960 1664 ntBASIC16.97■□□□□ 0.31
NDE1Q9NXR1 AC116353.5-201ENST00000638148 1699 ntBASIC16.97■□□□□ 0.31
NDE1Q9NXR1 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NDE1Q9NXR1 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.97■□□□□ 0.31
NDE1Q9NXR1 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NDE1Q9NXR1 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.96■□□□□ 0.31
NDE1Q9NXR1 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.96■□□□□ 0.31
NDE1Q9NXR1 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
NDE1Q9NXR1 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.96■□□□□ 0.31
NDE1Q9NXR1 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
NDE1Q9NXR1 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NDE1Q9NXR1 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NDE1Q9NXR1 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.96■□□□□ 0.31
NDE1Q9NXR1 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.96■□□□□ 0.31
NDE1Q9NXR1 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.96■□□□□ 0.31
NDE1Q9NXR1 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NDE1Q9NXR1 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.96■□□□□ 0.31
NDE1Q9NXR1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.96■□□□□ 0.31
NDE1Q9NXR1 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.96■□□□□ 0.31
NDE1Q9NXR1 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.96■□□□□ 0.31
NDE1Q9NXR1 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.96■□□□□ 0.31
NDE1Q9NXR1 RN7SL471P-201ENST00000580476 299 ntBASIC16.96■□□□□ 0.31
NDE1Q9NXR1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
NDE1Q9NXR1 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.96■□□□□ 0.31
NDE1Q9NXR1 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
NDE1Q9NXR1 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NDE1Q9NXR1 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
NDE1Q9NXR1 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.96■□□□□ 0.31
NDE1Q9NXR1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.96■□□□□ 0.31
NDE1Q9NXR1 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms