Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.06■□□□□ 03e-6■□□□□ 9.6
LARP4Q71RC2 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.93□□□□□ -0.023e-6■□□□□ 9.6
LARP4Q71RC2 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.6□□□□□ -0.073e-6■□□□□ 9.6
LARP4Q71RC2 CES1-207ENST00000565568 659 ntTSL 514.54□□□□□ -0.083e-6■□□□□ 9.6
LARP4Q71RC2 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.113e-6■□□□□ 9.6
LARP4Q71RC2 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.133e-6■□□□□ 9.6
LARP4Q71RC2 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.15□□□□□ -0.143e-6■□□□□ 9.6
LARP4Q71RC2 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.97□□□□□ -0.173e-6■□□□□ 9.6
LARP4Q71RC2 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.91□□□□□ -0.183e-6■□□□□ 9.6
LARP4Q71RC2 MPI-217ENST00000567177 1068 ntTSL 313.27□□□□□ -0.293e-6■□□□□ 9.6
LARP4Q71RC2 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.343e-6■□□□□ 9.6
LARP4Q71RC2 SHANK2-209ENST00000445654 522 ntTSL 312.44□□□□□ -0.423e-6■□□□□ 9.6
LARP4Q71RC2 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC12.43□□□□□ -0.423e-6■□□□□ 9.6
LARP4Q71RC2 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.433e-6■□□□□ 9.6
LARP4Q71RC2 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC12.34□□□□□ -0.433e-10■□□□□ 9.6
LARP4Q71RC2 AC073610.2-201ENST00000537495 406 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.453e-6■□□□□ 9.6
LARP4Q71RC2 MPI-208ENST00000563786 1707 ntTSL 5 BASIC12.2□□□□□ -0.463e-6■□□□□ 9.6
LARP4Q71RC2 RPUSD3-203ENST00000423108 756 ntTSL 212.03□□□□□ -0.483e-6■□□□□ 9.6
LARP4Q71RC2 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.553e-10■□□□□ 9.6
LARP4Q71RC2 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.563e-6■□□□□ 9.6
LARP4Q71RC2 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC11.41□□□□□ -0.583e-6■□□□□ 9.6
LARP4Q71RC2 SLC50A1-204ENST00000368405 1003 ntTSL 211.35□□□□□ -0.593e-10■□□□□ 9.6
LARP4Q71RC2 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC11.2□□□□□ -0.623e-6■□□□□ 9.6
LARP4Q71RC2 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC11.19□□□□□ -0.623e-6■□□□□ 9.6
LARP4Q71RC2 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC11.13□□□□□ -0.633e-10■□□□□ 9.6
LARP4Q71RC2 RPUSD3-211ENST00000464783 1149 ntTSL 211.12□□□□□ -0.633e-6■□□□□ 9.6
LARP4Q71RC2 SHANK2-205ENST00000412252 1376 ntTSL 511.11□□□□□ -0.633e-6■□□□□ 9.6
LARP4Q71RC2 MPI-214ENST00000566556 2795 nt10.8□□□□□ -0.683e-6■□□□□ 9.6
LARP4Q71RC2 COL2A1-208ENST00000493991 3756 ntTSL 210.72□□□□□ -0.693e-6■□□□□ 9.6
LARP4Q71RC2 VCP-204ENST00000466100 508 ntTSL 210.59□□□□□ -0.713e-6■□□□□ 9.6
LARP4Q71RC2 SLC50A1-208ENST00000484027 596 ntTSL 310.58□□□□□ -0.723e-10■□□□□ 9.6
LARP4Q71RC2 MPI-202ENST00000352410 5828 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.743e-6■□□□□ 9.6
LARP4Q71RC2 CES1-205ENST00000563241 509 ntTSL 310.28□□□□□ -0.763e-6■□□□□ 9.6
LARP4Q71RC2 FTCD-209ENST00000483568 398 ntTSL 510.19□□□□□ -0.783e-10■□□□□ 9.6
LARP4Q71RC2 MPI-201ENST00000323744 1619 ntTSL 1 (best) BASIC9.18□□□□□ -0.943e-6■□□□□ 9.6
LARP4Q71RC2 AC073610.3-201ENST00000398092 939 ntAPPRIS P1 TSL 3 BASIC8.88□□□□□ -0.993e-6■□□□□ 9.6
LARP4Q71RC2 NDUFS4-202ENST00000502423 562 ntTSL 58.71□□□□□ -1.023e-6■□□□□ 9.6
LARP4Q71RC2 MPI-213ENST00000566377 2809 ntTSL 1 (best) BASIC8.52□□□□□ -1.053e-6■□□□□ 9.6
LARP4Q71RC2 SHANK2-208ENST00000426687 460 ntTSL 57.92□□□□□ -1.143e-6■□□□□ 9.6
LARP4Q71RC2 SLC50A1-207ENST00000479579 475 ntTSL 37.8□□□□□ -1.163e-10■□□□□ 9.6
LARP4Q71RC2 COX7A2L-204ENST00000463055 540 ntTSL 1 (best) BASIC7.64□□□□□ -1.193e-6■□□□□ 9.6
LARP4Q71RC2 RPUSD3-212ENST00000466141 996 ntTSL 26.44□□□□□ -1.383e-6■□□□□ 9.6
LARP4Q71RC2 CES1-209ENST00000569260 499 ntTSL 53.88□□□□□ -1.793e-6■□□□□ 9.6
LARP4Q71RC2 PPP2R1A-202ENST00000391791 979 ntTSL 216.85■□□□□ 0.292e-6■□□□□ 9.6
LARP4Q71RC2 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.32e-6■□□□□ 9.6
LARP4Q71RC2 PPP2R1A-205ENST00000462990 2730 ntTSL 2 BASIC11.78□□□□□ -0.522e-6■□□□□ 9.6
LARP4Q71RC2 CD63-203ENST00000546457 607 ntTSL 212.87□□□□□ -0.352e-7■□□□□ 9.6
LARP4Q71RC2 PRCP-219ENST00000623464 7072 nt3.87□□□□□ -1.797e-10■□□□□ 9.6
LARP4Q71RC2 SORBS3-203ENST00000517535 3067 ntTSL 219.99■□□□□ 0.799e-7■□□□□ 9.6
LARP4Q71RC2 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.68■□□□□ 0.589e-7■□□□□ 9.6
LARP4Q71RC2 SORBS3-208ENST00000520207 576 ntTSL 217.97■□□□□ 0.479e-7■□□□□ 9.6
LARP4Q71RC2 SORBS3-201ENST00000240123 3459 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.549e-7■□□□□ 9.6
LARP4Q71RC2 SORBS3-204ENST00000517962 885 ntTSL 211.53□□□□□ -0.569e-7■□□□□ 9.6
LARP4Q71RC2 RPS13-209ENST00000533969 355 ntTSL 312.49□□□□□ -0.415e-12■□□□□ 9.6
LARP4Q71RC2 PSAP-204ENST00000495196 344 ntTSL 211.06□□□□□ -0.641e-20■□□□□ 9.6
LARP4Q71RC2 NEU4-211ENST00000435855 2281 ntTSL 221.66■■□□□ 1.061e-6■□□□□ 9.6
LARP4Q71RC2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.931e-6■□□□□ 9.6
LARP4Q71RC2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.811e-6■□□□□ 9.6
LARP4Q71RC2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.761e-6■□□□□ 9.6
LARP4Q71RC2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.41■□□□□ 0.71e-6■□□□□ 9.6
LARP4Q71RC2 NEU4-217ENST00000618597 3013 ntTSL 219.12■□□□□ 0.651e-6■□□□□ 9.6
LARP4Q71RC2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.04■□□□□ 0.641e-6■□□□□ 9.6
LARP4Q71RC2 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.33□□□□□ -0.123e-8■□□□□ 9.6
LARP4Q71RC2 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.243e-40■□□□□ 9.6
LARP4Q71RC2 RPS12-202ENST00000484616 639 ntTSL 22.75□□□□□ -1.973e-40■□□□□ 9.6
LARP4Q71RC2 TGFBI-202ENST00000503087 399 ntTSL 34.04□□□□□ -1.763e-7■□□□□ 9.5
LARP4Q71RC2 RPL17-219ENST00000584364 523 ntTSL 24.42□□□□□ -1.74e-27■□□□□ 9.5
LARP4Q71RC2 TBCA-204ENST00000517881 359 ntTSL 24.4□□□□□ -1.711e-11■□□□□ 9.5
LARP4Q71RC2 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.54■■□□□ 1.848e-24■□□□□ 9.5
LARP4Q71RC2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.548e-24■□□□□ 9.5
LARP4Q71RC2 CPNE1-204ENST00000397443 1928 ntAPPRIS P1 TSL 520.34■□□□□ 0.858e-24■□□□□ 9.5
LARP4Q71RC2 CPNE1-224ENST00000483359 1975 ntTSL 516.75■□□□□ 0.278e-24■□□□□ 9.5
LARP4Q71RC2 CPNE1-228ENST00000498814 550 ntTSL 314.5□□□□□ -0.098e-24■□□□□ 9.5
LARP4Q71RC2 CPNE1-225ENST00000483495 1853 ntTSL 513.08□□□□□ -0.328e-24■□□□□ 9.5
LARP4Q71RC2 CPNE1-209ENST00000415920 731 ntTSL 512.81□□□□□ -0.368e-24■□□□□ 9.5
LARP4Q71RC2 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC12.7□□□□□ -0.388e-24■□□□□ 9.5
LARP4Q71RC2 CPNE1-221ENST00000462352 625 ntTSL 211.06□□□□□ -0.648e-24■□□□□ 9.5
LARP4Q71RC2 CPNE1-222ENST00000473373 821 ntTSL 210.57□□□□□ -0.728e-24■□□□□ 9.5
LARP4Q71RC2 RANBP1-207ENST00000423859 832 ntTSL 316.76■□□□□ 0.272e-6■□□□□ 9.5
LARP4Q71RC2 RANBP1-203ENST00000411892 584 ntTSL 213.69□□□□□ -0.222e-6■□□□□ 9.5
LARP4Q71RC2 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.252e-6■□□□□ 9.5
LARP4Q71RC2 UBE2T-203ENST00000487227 885 ntTSL 312.01□□□□□ -0.492e-6■□□□□ 9.5
LARP4Q71RC2 RPS23-202ENST00000503605 595 ntTSL 315.38■□□□□ 0.051e-29■□□□□ 9.5
LARP4Q71RC2 RPS23-203ENST00000504293 576 ntTSL 1 (best)8.11□□□□□ -1.111e-29■□□□□ 9.5
LARP4Q71RC2 NFE2L2-205ENST00000430047 451 ntTSL 321.76■■□□□ 1.074e-19■□□□□ 9.5
LARP4Q71RC2 NFE2L2-210ENST00000462023 521 ntTSL 214.22□□□□□ -0.134e-19■□□□□ 9.5
LARP4Q71RC2 NFE2L2-214ENST00000588123 814 ntTSL 58.68□□□□□ -1.024e-19■□□□□ 9.5
LARP4Q71RC2 NFE2L2-213ENST00000586532 942 ntTSL 56.21□□□□□ -1.424e-19■□□□□ 9.5
LARP4Q71RC2 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.145e-38■□□□□ 9.5
LARP4Q71RC2 HMGB2-205ENST00000511316 1841 ntTSL 212.74□□□□□ -0.375e-38■□□□□ 9.5
LARP4Q71RC2 HMGB2-201ENST00000296503 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.635e-38■□□□□ 9.5
LARP4Q71RC2 HMGB2-202ENST00000438704 1032 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.225e-38■□□□□ 9.5
LARP4Q71RC2 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.89■□□□□ 0.611e-7■□□□□ 9.5
LARP4Q71RC2 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.221e-7■□□□□ 9.5
LARP4Q71RC2 TM9SF1-208ENST00000529332 2107 ntTSL 515.75■□□□□ 0.111e-7■□□□□ 9.5
LARP4Q71RC2 CCDC57-218ENST00000583593 429 ntTSL 312.14□□□□□ -0.471e-7■□□□□ 9.5
LARP4Q71RC2 WBP1-204ENST00000428943 989 ntTSL 522.41■■□□□ 1.181e-6■□□□□ 9.5
LARP4Q71RC2 WBP1-209ENST00000473467 847 ntTSL 222.13■■□□□ 1.131e-6■□□□□ 9.5
LARP4Q71RC2 WBP1-214ENST00000494741 1069 ntTSL 320.48■□□□□ 0.871e-6■□□□□ 9.5
LARP4Q71RC2 WBP1-208ENST00000470536 765 ntTSL 215.37■□□□□ 0.051e-6■□□□□ 9.5
Retrieved 100 of 15,922 protein–RNA pairs in 328.7 ms