RNA–Protein interactions for RNA: ENST00000462990.5

PPP2R1A-205, Transcript of protein phosphatase 2 scaffold subunit Aalpha, humanhuman

TSL 2 BASIC

Gene PPP2R1A, Length 2,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP2R1A-205ENST00000462990 NISCHQ9Y2I1 1504 aa24.34■■□□□ 1.49
PPP2R1A-205ENST00000462990 CCDC180Q9P1Z9 1646 aa21.49■■□□□ 1.03
PPP2R1A-205ENST00000462990 PELP1Q8IZL8 1130 aaKnown RBP21.02■□□□□ 0.96
PPP2R1A-205ENST00000462990 ABCC9O60706 1549 aa20.82■□□□□ 0.92
PPP2R1A-205ENST00000462990 HRCP23327 699 aa20.53■□□□□ 0.88
PPP2R1A-205ENST00000462990 MYT1Q01538 1121 aa20.47■□□□□ 0.87
PPP2R1A-205ENST00000462990 SHROOM4Q9ULL8 1493 aa20.38■□□□□ 0.85
PPP2R1A-205ENST00000462990 ZCCHC6Q5VYS8 1495 aaKnown RBP20.35■□□□□ 0.85
PPP2R1A-205ENST00000462990 DCAF8L2P0C7V8 631 aa20.19■□□□□ 0.82
PPP2R1A-205ENST00000462990 NACADO15069 1562 aa20.14■□□□□ 0.81
PPP2R1A-205ENST00000462990 DCAF1Q9Y4B6 1507 aa20.13■□□□□ 0.81
PPP2R1A-205ENST00000462990 MYO15BQ96JP2 1530 aa20.1■□□□□ 0.81
PPP2R1A-205ENST00000462990 RB1CC1Q8TDY2 1594 aa20.09■□□□□ 0.81
PPP2R1A-205ENST00000462990 PPARGC1BQ86YN6 1023 aaKnown RBP20■□□□□ 0.79
PPP2R1A-205ENST00000462990 SUPT5HO00267 1087 aaKnown RBP19.87■□□□□ 0.77
PPP2R1A-205ENST00000462990 SCAF1Q9H7N4 1312 aaKnown RBP19.82■□□□□ 0.76
PPP2R1A-205ENST00000462990 UNC13AQ9UPW8 1703 aa19.73■□□□□ 0.75
PPP2R1A-205ENST00000462990 SCRIBQ14160 1630 aa19.68■□□□□ 0.74
PPP2R1A-205ENST00000462990 PCGF6Q9BYE7 350 aa19.68■□□□□ 0.74
PPP2R1A-205ENST00000462990 BICRAQ9NZM4 1560 aa19.57■□□□□ 0.72
PPP2R1A-205ENST00000462990 PABPN1Q86U42 306 aaKnown RBP eCLIP19.51■□□□□ 0.71
PPP2R1A-205ENST00000462990 TTBK1Q5TCY1 1321 aaPredicted RBP19.45■□□□□ 0.7
PPP2R1A-205ENST00000462990 CHIC1Q5VXU3 224 aa19.14■□□□□ 0.65
PPP2R1A-205ENST00000462990 ACIN1Q9UKV3 1341 aaKnown RBP19.12■□□□□ 0.65
PPP2R1A-205ENST00000462990 ZEB1P37275 1124 aaPredicted RBP19.02■□□□□ 0.64
PPP2R1A-205ENST00000462990 NEUROD1Q13562 356 aa19.01■□□□□ 0.63
PPP2R1A-205ENST00000462990 GTF3C3Q9Y5Q9 886 aa18.99■□□□□ 0.63
PPP2R1A-205ENST00000462990 CECR2Q9BXF3 1484 aa18.98■□□□□ 0.63
PPP2R1A-205ENST00000462990 EIF4G1Q04637 1599 aaKnown RBP18.98■□□□□ 0.63
PPP2R1A-205ENST00000462990 BCL11AQ9H165 835 aa18.96■□□□□ 0.63
PPP2R1A-205ENST00000462990 RSF1Q96T23 1441 aaPredicted RBP18.96■□□□□ 0.63
PPP2R1A-205ENST00000462990 DNAJC5BQ9UF47 199 aa18.94■□□□□ 0.62
PPP2R1A-205ENST00000462990 TRIM26Q12899 539 aaPredicted RBP18.88■□□□□ 0.61
PPP2R1A-205ENST00000462990 CENPBP07199 599 aaPredicted RBP18.86■□□□□ 0.61
PPP2R1A-205ENST00000462990 CC2D2AQ9P2K1 1620 aa18.85■□□□□ 0.61
PPP2R1A-205ENST00000462990 SMARCA4P51532 1647 aa18.84■□□□□ 0.61
PPP2R1A-205ENST00000462990 BAZ1AQ9NRL2 1556 aaPredicted RBP18.82■□□□□ 0.6
PPP2R1A-205ENST00000462990 PRKCSHP14314 528 aaPredicted RBP18.81■□□□□ 0.6
PPP2R1A-205ENST00000462990 MROH2BQ7Z745 1585 aa18.8■□□□□ 0.6
PPP2R1A-205ENST00000462990 FAM9AQ8IZU1 332 aaPredicted RBP18.78■□□□□ 0.6
PPP2R1A-205ENST00000462990 ATAD2BQ9ULI0 1458 aa18.67■□□□□ 0.58
PPP2R1A-205ENST00000462990 PEG3Q9GZU2 1588 aa18.65■□□□□ 0.58
PPP2R1A-205ENST00000462990 LOC105371045A0A1W2PR82 267 aa18.62■□□□□ 0.57
PPP2R1A-205ENST00000462990 SMARCA2P51531 1590 aa18.61■□□□□ 0.57
PPP2R1A-205ENST00000462990 WIZO95785 1651 aa18.61■□□□□ 0.57
PPP2R1A-205ENST00000462990 NCAPD3P42695 1498 aa18.6■□□□□ 0.57
PPP2R1A-205ENST00000462990 HMGXB3Q12766 1538 aa18.53■□□□□ 0.56
PPP2R1A-205ENST00000462990 BAZ1BQ9UIG0 1483 aaKnown RBP18.5■□□□□ 0.55
PPP2R1A-205ENST00000462990 TRIM41Q8WV44 630 aa18.47■□□□□ 0.55
PPP2R1A-205ENST00000462990 ANP32EQ9BTT0 268 aa18.47■□□□□ 0.55
PPP2R1A-205ENST00000462990 ERICH6Q7L0X2 663 aa18.43■□□□□ 0.54
PPP2R1A-205ENST00000462990 TOP2AP11388 1531 aaKnown RBP18.39■□□□□ 0.53
PPP2R1A-205ENST00000462990 DIEXFQ68CQ4 756 aaKnown RBP18.36■□□□□ 0.53
PPP2R1A-205ENST00000462990 EHMT2Q96KQ7 1210 aa18.33■□□□□ 0.52
PPP2R1A-205ENST00000462990 CSRNP3Q8WYN3 585 aa18.28■□□□□ 0.52
PPP2R1A-205ENST00000462990 APLP2Q06481 763 aa18.25■□□□□ 0.51
PPP2R1A-205ENST00000462990 CCDC88BA6NC98 1476 aa18.22■□□□□ 0.51
PPP2R1A-205ENST00000462990 NESP48681 1621 aa18.13■□□□□ 0.49
PPP2R1A-205ENST00000462990 YTHDC1Q96MU7 727 aaKnown RBP18.11■□□□□ 0.49
PPP2R1A-205ENST00000462990 ABCC8Q09428 1581 aa18.09■□□□□ 0.49
PPP2R1A-205ENST00000462990 CADPSQ9ULU8 1353 aa18.07■□□□□ 0.48
PPP2R1A-205ENST00000462990 LAMC3Q9Y6N6 1575 aa18.05■□□□□ 0.48
PPP2R1A-205ENST00000462990 TSHZ2Q9NRE2 1034 aa18.03■□□□□ 0.48
PPP2R1A-205ENST00000462990 CFTRP13569 1480 aa18.03■□□□□ 0.48
PPP2R1A-205ENST00000462990 CCER1Q8TC90 406 aaPredicted RBP17.97■□□□□ 0.47
PPP2R1A-205ENST00000462990 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.95■□□□□ 0.46
PPP2R1A-205ENST00000462990 KIF21AQ7Z4S6 1674 aa17.91■□□□□ 0.46
PPP2R1A-205ENST00000462990 PRDM2Q13029 1718 aa17.9■□□□□ 0.46
PPP2R1A-205ENST00000462990 PDS5BQ9NTI5 1447 aa17.89■□□□□ 0.45
PPP2R1A-205ENST00000462990 SUPT16HQ9Y5B9 1047 aaKnown RBP17.89■□□□□ 0.45
PPP2R1A-205ENST00000462990 CLSPNQ9HAW4 1339 aa17.89■□□□□ 0.45
PPP2R1A-205ENST00000462990 ERCC6Q03468 1493 aa17.87■□□□□ 0.45
PPP2R1A-205ENST00000462990 FANCD2Q9BXW9 1451 aa17.87■□□□□ 0.45
PPP2R1A-205ENST00000462990 SOGA1O94964 1423 aa17.86■□□□□ 0.45
PPP2R1A-205ENST00000462990 ZNF316A6NFI3 1004 aaPredicted RBP17.83■□□□□ 0.45
PPP2R1A-205ENST00000462990 MIER1Q8N108 512 aa17.81■□□□□ 0.44
PPP2R1A-205ENST00000462990 RUSC2Q8N2Y8 1516 aa17.8■□□□□ 0.44
PPP2R1A-205ENST00000462990 CEP164Q9UPV0 1460 aa17.8■□□□□ 0.44
PPP2R1A-205ENST00000462990 WRNQ14191 1432 aaPredicted RBP eCLIP17.79■□□□□ 0.44
PPP2R1A-205ENST00000462990 THOC2Q8NI27 1593 aaKnown RBP17.78■□□□□ 0.44
PPP2R1A-205ENST00000462990 SYNJ1O43426 1573 aa17.75■□□□□ 0.43
PPP2R1A-205ENST00000462990 MRC2Q9UBG0 1479 aa17.73■□□□□ 0.43
PPP2R1A-205ENST00000462990 URB2Q14146 1524 aaKnown RBP17.71■□□□□ 0.43
PPP2R1A-205ENST00000462990 EEA1Q15075 1411 aa17.69■□□□□ 0.42
PPP2R1A-205ENST00000462990 ANO8Q9HCE9 1232 aaPredicted RBP17.69■□□□□ 0.42
PPP2R1A-205ENST00000462990 WDR62O43379 1518 aa17.68■□□□□ 0.42
PPP2R1A-205ENST00000462990 UBTFP17480 764 aaKnown RBP17.66■□□□□ 0.42
PPP2R1A-205ENST00000462990 CEP162Q5TB80 1403 aa17.64■□□□□ 0.41
PPP2R1A-205ENST00000462990 TNIKQ9UKE5 1360 aa17.63■□□□□ 0.41
PPP2R1A-205ENST00000462990 TOPBP1Q92547 1522 aa17.63■□□□□ 0.41
PPP2R1A-205ENST00000462990 CUX1P39880 1505 aa17.62■□□□□ 0.41
PPP2R1A-205ENST00000462990 DNMBPQ6XZF7 1577 aa17.61■□□□□ 0.41
PPP2R1A-205ENST00000462990 CUX2O14529 1486 aa17.59■□□□□ 0.41
PPP2R1A-205ENST00000462990 GOLGA3Q08378 1498 aa17.57■□□□□ 0.4
PPP2R1A-205ENST00000462990 TOP2BQ02880 1626 aa17.54■□□□□ 0.4
PPP2R1A-205ENST00000462990 RBM19Q9Y4C8 960 aaKnown RBP17.54■□□□□ 0.4
PPP2R1A-205ENST00000462990 BIVM-ERCC5R4GMW8 1640 aa17.5■□□□□ 0.39
PPP2R1A-205ENST00000462990 KIF21BO75037 1637 aa17.5■□□□□ 0.39
PPP2R1A-205ENST00000462990 POLA1P09884 1462 aaPredicted RBP17.5■□□□□ 0.39
PPP2R1A-205ENST00000462990 FGD5Q6ZNL6 1462 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms