Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.561e-8■□□□□ 8.6
SRSF1Q07955 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.69■□□□□ 0.421e-8■□□□□ 8.6
SRSF1Q07955 TFRC-204ENST00000421258 524 ntTSL 313.46□□□□□ -0.255e-13■□□□□ 8.6
SRSF1Q07955 NIPSNAP1-202ENST00000415100 661 ntTSL 522.15■■□□□ 1.146e-9■□□□□ 8.6
SRSF1Q07955 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.266e-9■□□□□ 8.6
SRSF1Q07955 FKBP10-207ENST00000490938 837 ntTSL 214.86□□□□□ -0.036e-9■□□□□ 8.6
SRSF1Q07955 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.396e-9■□□□□ 8.6
SRSF1Q07955 NIPSNAP1-203ENST00000437094 674 ntTSL 311.38□□□□□ -0.596e-9■□□□□ 8.6
SRSF1Q07955 NIPSNAP1-204ENST00000455496 600 ntTSL 310.78□□□□□ -0.686e-9■□□□□ 8.6
SRSF1Q07955 MALAT1-208ENST00000616527 572 ntTSL 3 BASIC6.19□□□□□ -1.422e-77■□□□□ 8.6
SRSF1Q07955 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.67□□□□□ -1.52e-77■□□□□ 8.6
SRSF1Q07955 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.88□□□□□ -1.792e-77■□□□□ 8.6
SRSF1Q07955 MALAT1-216ENST00000620465 333 ntTSL 23.81□□□□□ -1.82e-77■□□□□ 8.6
SRSF1Q07955 SF3B2-208ENST00000529994 1004 ntTSL 211.59□□□□□ -0.556e-8■□□□□ 8.6
SRSF1Q07955 ACIN1-216ENST00000555478 1017 ntTSL 512.79□□□□□ -0.361e-9■□□□□ 8.6
SRSF1Q07955 ACIN1-210ENST00000554680 888 ntTSL 29.04□□□□□ -0.961e-9■□□□□ 8.6
SRSF1Q07955 ACIN1-215ENST00000555395 514 ntTSL 28.82□□□□□ -11e-9■□□□□ 8.6
SRSF1Q07955 MTHFR-201ENST00000376486 875 ntTSL 1 (best)18.84■□□□□ 0.613e-7■□□□□ 8.6
SRSF1Q07955 MTHFR-211ENST00000641437 1911 nt13.5□□□□□ -0.253e-7■□□□□ 8.6
SRSF1Q07955 MTHFR-218ENST00000641909 2254 nt11.67□□□□□ -0.543e-7■□□□□ 8.6
SRSF1Q07955 MTHFR-210ENST00000641407 2387 ntBASIC11.67□□□□□ -0.543e-7■□□□□ 8.6
SRSF1Q07955 MTHFR-216ENST00000641805 2945 nt10.79□□□□□ -0.683e-7■□□□□ 8.6
SRSF1Q07955 MTHFR-212ENST00000641446 2820 nt10.45□□□□□ -0.743e-7■□□□□ 8.6
SRSF1Q07955 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.743e-7■□□□□ 8.6
SRSF1Q07955 MTHFR-213ENST00000641721 891 nt10.21□□□□□ -0.773e-7■□□□□ 8.6
SRSF1Q07955 MTHFR-202ENST00000376583 7044 ntAPPRIS ALT1 TSL 5 BASIC10.11□□□□□ -0.793e-7■□□□□ 8.6
SRSF1Q07955 MTHFR-204ENST00000376590 7094 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.853e-7■□□□□ 8.6
SRSF1Q07955 MTHFR-203ENST00000376585 8094 ntAPPRIS ALT1 TSL 5 BASIC9.71□□□□□ -0.853e-7■□□□□ 8.6
SRSF1Q07955 MTHFR-215ENST00000641759 2454 nt9.61□□□□□ -0.873e-7■□□□□ 8.6
SRSF1Q07955 MTHFR-214ENST00000641747 3227 nt9.09□□□□□ -0.953e-7■□□□□ 8.6
SRSF1Q07955 WDR4-206ENST00000479429 759 ntTSL 520.39■□□□□ 0.857e-7■□□□□ 8.6
SRSF1Q07955 WDR4-203ENST00000463902 609 ntTSL 313.48□□□□□ -0.257e-7■□□□□ 8.6
SRSF1Q07955 PTP4A1-207ENST00000639568 532 ntTSL 511.95□□□□□ -0.57e-7■□□□□ 8.6
SRSF1Q07955 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.762e-9■□□□□ 8.6
SRSF1Q07955 ABCC3-203ENST00000502426 5326 ntTSL 210.21□□□□□ -0.772e-9■□□□□ 8.6
SRSF1Q07955 ABCC3-207ENST00000505699 5271 ntTSL 210.11□□□□□ -0.792e-9■□□□□ 8.6
SRSF1Q07955 MYO10-210ENST00000513610 8038 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.837e-7■□□□□ 8.6
SRSF1Q07955 MYO10-212ENST00000515803 4839 ntTSL 2 BASIC9.37□□□□□ -0.917e-7■□□□□ 8.6
SRSF1Q07955 MYO10-203ENST00000505695 4803 ntTSL 2 BASIC8.58□□□□□ -1.047e-7■□□□□ 8.6
SRSF1Q07955 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.287e-7■□□□□ 8.6
SRSF1Q07955 PTP4A1-202ENST00000470661 479 ntTSL 26.3□□□□□ -1.47e-7■□□□□ 8.6
SRSF1Q07955 PYGB-202ENST00000428458 734 ntTSL 311.43□□□□□ -0.582e-9■□□□□ 8.5
SRSF1Q07955 PSMA6-202ENST00000540871 912 ntTSL 2 BASIC7.54□□□□□ -1.22e-9■□□□□ 8.5
SRSF1Q07955 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.62e-9■□□□□ 8.5
SRSF1Q07955 SMARCD2-206ENST00000577990 449 ntTSL 320.64■□□□□ 0.892e-6■□□□□ 8.5
SRSF1Q07955 TPM4-208ENST00000588410 563 ntTSL 418.39■□□□□ 0.532e-6■□□□□ 8.5
SRSF1Q07955 TPM4-204ENST00000586499 708 ntTSL 417.93■□□□□ 0.462e-6■□□□□ 8.5
SRSF1Q07955 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC16.92■□□□□ 0.32e-6■□□□□ 8.5
SRSF1Q07955 TPM4-206ENST00000587201 877 ntTSL 216.69■□□□□ 0.262e-6■□□□□ 8.5
SRSF1Q07955 LMNA-211ENST00000470199 551 ntTSL 416.36■□□□□ 0.212e-6■□□□□ 8.5
SRSF1Q07955 MAN2A2-223ENST00000560534 361 ntTSL 516.26■□□□□ 0.192e-6■□□□□ 8.5
SRSF1Q07955 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.112e-6■□□□□ 8.5
SRSF1Q07955 LMNA-219ENST00000502751 570 ntTSL 415.68■□□□□ 0.12e-6■□□□□ 8.5
SRSF1Q07955 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.76□□□□□ -0.052e-6■□□□□ 8.5
SRSF1Q07955 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC13.87□□□□□ -0.192e-6■□□□□ 8.5
SRSF1Q07955 USP33-211ENST00000524536 949 ntTSL 313.6□□□□□ -0.232e-6■□□□□ 8.5
SRSF1Q07955 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC13.58□□□□□ -0.242e-6■□□□□ 8.5
SRSF1Q07955 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.5□□□□□ -0.252e-6■□□□□ 8.5
SRSF1Q07955 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC13.04□□□□□ -0.322e-6■□□□□ 8.5
SRSF1Q07955 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.342e-6■□□□□ 8.5
SRSF1Q07955 GOLGA2-204ENST00000461031 475 ntTSL 312.92□□□□□ -0.342e-6■□□□□ 8.5
SRSF1Q07955 LMNA-210ENST00000469565 591 ntTSL 412.79□□□□□ -0.362e-6■□□□□ 8.5
SRSF1Q07955 TPM4-205ENST00000586833 558 ntTSL 512.76□□□□□ -0.372e-6■□□□□ 8.5
SRSF1Q07955 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.372e-6■□□□□ 8.5
SRSF1Q07955 DHDDS-212ENST00000525165 573 ntTSL 212.58□□□□□ -0.42e-6■□□□□ 8.5
SRSF1Q07955 DHDDS-213ENST00000525326 492 ntTSL 412.54□□□□□ -0.42e-6■□□□□ 8.5
SRSF1Q07955 ZNF544-210ENST00000597240 555 ntTSL 512.52□□□□□ -0.412e-6■□□□□ 8.5
SRSF1Q07955 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.412e-6■□□□□ 8.5
SRSF1Q07955 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.03□□□□□ -0.482e-6■□□□□ 8.5
SRSF1Q07955 DHDDS-219ENST00000527611 297 ntTSL 311.85□□□□□ -0.512e-6■□□□□ 8.5
SRSF1Q07955 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.532e-6■□□□□ 8.5
SRSF1Q07955 ZNF544-209ENST00000596929 543 ntTSL 4 BASIC11.55□□□□□ -0.562e-6■□□□□ 8.5
SRSF1Q07955 ZNF544-218ENST00000600775 533 ntTSL 411.39□□□□□ -0.592e-6■□□□□ 8.5
SRSF1Q07955 TPM4-212ENST00000590180 521 ntTSL 311.29□□□□□ -0.62e-6■□□□□ 8.5
SRSF1Q07955 DHDDS-220ENST00000528557 516 ntTSL 411.21□□□□□ -0.612e-6■□□□□ 8.5
SRSF1Q07955 DHDDS-221ENST00000529688 589 ntTSL 411.21□□□□□ -0.612e-6■□□□□ 8.5
SRSF1Q07955 DHDDS-214ENST00000525410 595 ntTSL 411.18□□□□□ -0.622e-6■□□□□ 8.5
SRSF1Q07955 AC020915.6-202ENST00000637310 1463 ntAPPRIS ALT2 TSL 511.15□□□□□ -0.622e-6■□□□□ 8.5
SRSF1Q07955 DHDDS-216ENST00000525682 1235 ntTSL 2 BASIC11.15□□□□□ -0.622e-6■□□□□ 8.5
SRSF1Q07955 DHDDS-210ENST00000436153 705 ntTSL 211.04□□□□□ -0.642e-6■□□□□ 8.5
SRSF1Q07955 ZNF544-203ENST00000594384 588 ntTSL 1 (best) BASIC10.87□□□□□ -0.672e-6■□□□□ 8.5
SRSF1Q07955 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC10.85□□□□□ -0.672e-6■□□□□ 8.5
SRSF1Q07955 DHDDS-203ENST00000374185 1148 ntTSL 2 BASIC10.77□□□□□ -0.692e-6■□□□□ 8.5
SRSF1Q07955 DHDDS-201ENST00000236342 1403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.692e-6■□□□□ 8.5
SRSF1Q07955 ZNF544-205ENST00000596597 573 ntTSL 310.55□□□□□ -0.722e-6■□□□□ 8.5
SRSF1Q07955 DHDDS-211ENST00000487944 717 ntTSL 210.37□□□□□ -0.752e-6■□□□□ 8.5
SRSF1Q07955 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC10.37□□□□□ -0.752e-6■□□□□ 8.5
SRSF1Q07955 TPM4-209ENST00000588483 801 ntTSL 59.83□□□□□ -0.842e-6■□□□□ 8.5
SRSF1Q07955 USP33-204ENST00000370794 4327 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.852e-6■□□□□ 8.5
SRSF1Q07955 DHDDS-204ENST00000374186 656 ntTSL 39.69□□□□□ -0.862e-6■□□□□ 8.5
SRSF1Q07955 LMNA-206ENST00000368300 3190 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.892e-6■□□□□ 8.5
SRSF1Q07955 ZNF544-208ENST00000596825 3516 ntTSL 1 (best) BASIC9.49□□□□□ -0.892e-6■□□□□ 8.5
SRSF1Q07955 MROH1-211ENST00000544576 3673 ntTSL 1 (best) BASIC9.09□□□□□ -0.952e-6■□□□□ 8.5
SRSF1Q07955 ZNF544-212ENST00000598880 570 ntTSL 58.92□□□□□ -0.982e-6■□□□□ 8.5
SRSF1Q07955 TPM4-215ENST00000592138 635 ntTSL 28.91□□□□□ -0.982e-6■□□□□ 8.5
SRSF1Q07955 ZNF544-204ENST00000595981 895 ntTSL 3 BASIC8.81□□□□□ -12e-6■□□□□ 8.5
SRSF1Q07955 DHDDS-215ENST00000525546 581 ntTSL 28.76□□□□□ -1.012e-6■□□□□ 8.5
SRSF1Q07955 ZNF544-213ENST00000599227 3587 ntTSL 1 (best) BASIC8.55□□□□□ -1.042e-6■□□□□ 8.5
SRSF1Q07955 TPM4-210ENST00000588507 367 ntTSL 38.53□□□□□ -1.042e-6■□□□□ 8.5
SRSF1Q07955 ZNF544-220ENST00000627781 383 ntTSL 2 BASIC8.4□□□□□ -1.062e-6■□□□□ 8.5
Retrieved 100 of 14,836 protein–RNA pairs in 72.4 ms