RNA–Protein interactions for RNA: ENST00000437094.5

NIPSNAP1-203, Transcript of nipsnap homolog 1, humanhuman

TSL 3

Gene NIPSNAP1, Length 674 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP1-203ENST00000437094 NISCHQ9Y2I1 1504 aa29.86■■■□□ 2.37
NIPSNAP1-203ENST00000437094 CCDC180Q9P1Z9 1646 aa26.6■■□□□ 1.85
NIPSNAP1-203ENST00000437094 ABCC9O60706 1549 aa26.19■■□□□ 1.78
NIPSNAP1-203ENST00000437094 RB1CC1Q8TDY2 1594 aa25.09■■□□□ 1.61
NIPSNAP1-203ENST00000437094 DCAF8L2P0C7V8 631 aa25.06■■□□□ 1.6
NIPSNAP1-203ENST00000437094 NACADO15069 1562 aa25.01■■□□□ 1.59
NIPSNAP1-203ENST00000437094 ZCCHC6Q5VYS8 1495 aaKnown RBP24.85■■□□□ 1.57
NIPSNAP1-203ENST00000437094 MYO15BQ96JP2 1530 aa24.78■■□□□ 1.56
NIPSNAP1-203ENST00000437094 DCAF1Q9Y4B6 1507 aa24.65■■□□□ 1.54
NIPSNAP1-203ENST00000437094 UNC13AQ9UPW8 1703 aa24.6■■□□□ 1.53
NIPSNAP1-203ENST00000437094 PABPN1Q86U42 306 aaKnown RBP eCLIP24.45■■□□□ 1.5
NIPSNAP1-203ENST00000437094 BICRAQ9NZM4 1560 aa24.37■■□□□ 1.49
NIPSNAP1-203ENST00000437094 SCRIBQ14160 1630 aa24.32■■□□□ 1.48
NIPSNAP1-203ENST00000437094 DNAJC5BQ9UF47 199 aa24.13■■□□□ 1.45
NIPSNAP1-203ENST00000437094 SHROOM4Q9ULL8 1493 aa24■■□□□ 1.43
NIPSNAP1-203ENST00000437094 EIF4G1Q04637 1599 aaKnown RBP23.72■■□□□ 1.39
NIPSNAP1-203ENST00000437094 CC2D2AQ9P2K1 1620 aa23.66■■□□□ 1.38
NIPSNAP1-203ENST00000437094 CECR2Q9BXF3 1484 aa23.51■■□□□ 1.35
NIPSNAP1-203ENST00000437094 SMARCA4P51532 1647 aa23.22■■□□□ 1.31
NIPSNAP1-203ENST00000437094 BAZ1AQ9NRL2 1556 aaPredicted RBP23.14■■□□□ 1.3
NIPSNAP1-203ENST00000437094 ATAD2BQ9ULI0 1458 aa23.11■■□□□ 1.29
NIPSNAP1-203ENST00000437094 NCAPD3P42695 1498 aa23.07■■□□□ 1.28
NIPSNAP1-203ENST00000437094 SMARCA2P51531 1590 aa23.06■■□□□ 1.28
NIPSNAP1-203ENST00000437094 MROH2BQ7Z745 1585 aa23.06■■□□□ 1.28
NIPSNAP1-203ENST00000437094 HMGXB3Q12766 1538 aa22.97■■□□□ 1.27
NIPSNAP1-203ENST00000437094 PEG3Q9GZU2 1588 aa22.94■■□□□ 1.26
NIPSNAP1-203ENST00000437094 BAZ1BQ9UIG0 1483 aaKnown RBP22.92■■□□□ 1.26
NIPSNAP1-203ENST00000437094 WIZO95785 1651 aa22.82■■□□□ 1.24
NIPSNAP1-203ENST00000437094 RSF1Q96T23 1441 aaPredicted RBP22.72■■□□□ 1.23
NIPSNAP1-203ENST00000437094 NESP48681 1621 aa22.64■■□□□ 1.21
NIPSNAP1-203ENST00000437094 ERCC6Q03468 1493 aa22.56■■□□□ 1.2
NIPSNAP1-203ENST00000437094 TOP2AP11388 1531 aaKnown RBP22.52■■□□□ 1.2
NIPSNAP1-203ENST00000437094 LAMC3Q9Y6N6 1575 aa22.5■■□□□ 1.19
NIPSNAP1-203ENST00000437094 CADPSQ9ULU8 1353 aa22.41■■□□□ 1.18
NIPSNAP1-203ENST00000437094 KIF21AQ7Z4S6 1674 aa22.38■■□□□ 1.17
NIPSNAP1-203ENST00000437094 PDS5BQ9NTI5 1447 aa22.34■■□□□ 1.17
NIPSNAP1-203ENST00000437094 CUX2O14529 1486 aa22.32■■□□□ 1.16
NIPSNAP1-203ENST00000437094 THOC2Q8NI27 1593 aaKnown RBP22.29■■□□□ 1.16
NIPSNAP1-203ENST00000437094 CCDC88BA6NC98 1476 aa22.27■■□□□ 1.16
NIPSNAP1-203ENST00000437094 CFTRP13569 1480 aa22.25■■□□□ 1.15
NIPSNAP1-203ENST00000437094 FANCD2Q9BXW9 1451 aa22.18■■□□□ 1.14
NIPSNAP1-203ENST00000437094 CEP164Q9UPV0 1460 aa22.16■■□□□ 1.14
NIPSNAP1-203ENST00000437094 MRC2Q9UBG0 1479 aa22.15■■□□□ 1.14
NIPSNAP1-203ENST00000437094 PRDM2Q13029 1718 aa22.14■■□□□ 1.13
NIPSNAP1-203ENST00000437094 SUPT5HO00267 1087 aaKnown RBP22.12■■□□□ 1.13
NIPSNAP1-203ENST00000437094 WDR62O43379 1518 aa22.07■■□□□ 1.12
NIPSNAP1-203ENST00000437094 URB2Q14146 1524 aaKnown RBP21.98■■□□□ 1.11
NIPSNAP1-203ENST00000437094 TOPBP1Q92547 1522 aa21.82■■□□□ 1.08
NIPSNAP1-203ENST00000437094 DNMBPQ6XZF7 1577 aa21.78■■□□□ 1.08
NIPSNAP1-203ENST00000437094 DNAJC5Q9H3Z4 198 aa21.76■■□□□ 1.07
NIPSNAP1-203ENST00000437094 ABCC8Q09428 1581 aa21.74■■□□□ 1.07
NIPSNAP1-203ENST00000437094 IFT140Q96RY7 1462 aa21.68■■□□□ 1.06
NIPSNAP1-203ENST00000437094 ZNF608Q9ULD9 1512 aaPredicted RBP21.64■■□□□ 1.05
NIPSNAP1-203ENST00000437094 CUX1P39880 1505 aa21.63■■□□□ 1.05
NIPSNAP1-203ENST00000437094 POLA1P09884 1462 aaPredicted RBP21.63■■□□□ 1.05
NIPSNAP1-203ENST00000437094 TARBP1Q13395 1621 aaKnown RBP21.59■■□□□ 1.05
NIPSNAP1-203ENST00000437094 FGD5Q6ZNL6 1462 aa21.57■■□□□ 1.04
NIPSNAP1-203ENST00000437094 RAD54L2Q9Y4B4 1467 aa21.56■■□□□ 1.04
NIPSNAP1-203ENST00000437094 EIF4G3O43432 1585 aaKnown RBP21.55■■□□□ 1.04
NIPSNAP1-203ENST00000437094 SOGA1O94964 1423 aa21.53■■□□□ 1.04
NIPSNAP1-203ENST00000437094 AQRO60306 1485 aaKnown RBP eCLIP21.5■■□□□ 1.033e-8■■■■■ 31.9
NIPSNAP1-203ENST00000437094 TDRD9Q8NDG6 1382 aaKnown RBP21.44■■□□□ 1.02
NIPSNAP1-203ENST00000437094 WRNQ14191 1432 aaPredicted RBP eCLIP21.42■■□□□ 1.02
NIPSNAP1-203ENST00000437094 SYNJ1O43426 1573 aa21.41■■□□□ 1.02
NIPSNAP1-203ENST00000437094 WDR97A6NE52 1622 aa21.4■■□□□ 1.02
NIPSNAP1-203ENST00000437094 BIVM-ERCC5R4GMW8 1640 aa21.4■■□□□ 1.02
NIPSNAP1-203ENST00000437094 TOP2BQ02880 1626 aa21.39■■□□□ 1.01
NIPSNAP1-203ENST00000437094 OSCARQ8IYS5 282 aa21.37■■□□□ 1.01
NIPSNAP1-203ENST00000437094 CHD1O14646 1710 aa21.33■■□□□ 1.01
NIPSNAP1-203ENST00000437094 ABCA10Q8WWZ4 1543 aa21.32■■□□□ 1
NIPSNAP1-203ENST00000437094 SNAPC4Q5SXM2 1469 aa21.3■■□□□ 1
NIPSNAP1-203ENST00000437094 PBRM1Q86U86 1689 aa21.28■■□□□ 1
NIPSNAP1-203ENST00000437094 GRIN2BQ13224 1484 aa21.28■■□□□ 1
NIPSNAP1-203ENST00000437094 FBLN2P98095 1184 aa21.28■■□□□ 1
NIPSNAP1-203ENST00000437094 GAPVD1Q14C86 1478 aa21.27■■□□□ 1
NIPSNAP1-203ENST00000437094 ABCA5Q8WWZ7 1642 aa21.27■■□□□ 1
NIPSNAP1-203ENST00000437094 MAGI1Q96QZ7 1491 aaPredicted RBP21.22■□□□□ 0.99
NIPSNAP1-203ENST00000437094 CHMP7Q8WUX9 453 aaPredicted RBP21.16■□□□□ 0.98
NIPSNAP1-203ENST00000437094 SYNJ2O15056 1496 aa21.15■□□□□ 0.98
NIPSNAP1-203ENST00000437094 RIMBP3CA6NJZ7 1639 aa21.11■□□□□ 0.97
NIPSNAP1-203ENST00000437094 RIMBP3BA6NNM3 1639 aa21.11■□□□□ 0.97
NIPSNAP1-203ENST00000437094 RIMBP3Q9UFD9 1639 aa21.11■□□□□ 0.97
NIPSNAP1-203ENST00000437094 TRIM41Q8WV44 630 aa21.09■□□□□ 0.97
NIPSNAP1-203ENST00000437094 ADAMTS12P58397 1594 aa21.09■□□□□ 0.97
NIPSNAP1-203ENST00000437094 ARHGEF11O15085 1522 aa21.07■□□□□ 0.96
NIPSNAP1-203ENST00000437094 ERICH3Q5RHP9 1530 aa21.06■□□□□ 0.96
NIPSNAP1-203ENST00000437094 CLASP1Q7Z460 1538 aa21.04■□□□□ 0.96
NIPSNAP1-203ENST00000437094 GRIN2AQ12879 1464 aa21.02■□□□□ 0.96
NIPSNAP1-203ENST00000437094 FHAD1B1AJZ9 1412 aa21.01■□□□□ 0.95
NIPSNAP1-203ENST00000437094 KIF27Q86VH2 1401 aa20.97■□□□□ 0.95
NIPSNAP1-203ENST00000437094 CEP170Q5SW79 1584 aa20.94■□□□□ 0.94
NIPSNAP1-203ENST00000437094 NUP160Q12769 1436 aa20.91■□□□□ 0.94
NIPSNAP1-203ENST00000437094 ARAP1Q96P48 1450 aa20.9■□□□□ 0.94
NIPSNAP1-203ENST00000437094 IGF1RP08069 1367 aa20.9■□□□□ 0.94
NIPSNAP1-203ENST00000437094 CYB5RLQ6IPT4 315 aa20.89■□□□□ 0.93
NIPSNAP1-203ENST00000437094 CUL7Q14999 1698 aa20.86■□□□□ 0.93
NIPSNAP1-203ENST00000437094 RUSC2Q8N2Y8 1516 aa20.81■□□□□ 0.92
NIPSNAP1-203ENST00000437094 ERCC6L2Q5T890 1561 aa20.8■□□□□ 0.92
NIPSNAP1-203ENST00000437094 CARMIL1Q5VZK9 1371 aa20.79■□□□□ 0.92
NIPSNAP1-203ENST00000437094 SHROOM2Q13796 1616 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms