RNA–Protein interactions for RNA: ENST00000596929.5

ZNF544-209, Transcript of zinc finger protein 544, humanhuman

TSL 4 BASIC

Gene ZNF544, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-209ENST00000596929 NISCHQ9Y2I1 1504 aa29.66■■■□□ 2.34
ZNF544-209ENST00000596929 CCDC180Q9P1Z9 1646 aa26.6■■□□□ 1.85
ZNF544-209ENST00000596929 ABCC9O60706 1549 aa26.45■■□□□ 1.83
ZNF544-209ENST00000596929 RB1CC1Q8TDY2 1594 aa25.3■■□□□ 1.64
ZNF544-209ENST00000596929 NACADO15069 1562 aa25.16■■□□□ 1.62
ZNF544-209ENST00000596929 MYO15BQ96JP2 1530 aa24.91■■□□□ 1.58
ZNF544-209ENST00000596929 DCAF8L2P0C7V8 631 aa24.91■■□□□ 1.58
ZNF544-209ENST00000596929 DNAJC5BQ9UF47 199 aa24.73■■□□□ 1.55
ZNF544-209ENST00000596929 PABPN1Q86U42 306 aaKnown RBP eCLIP24.62■■□□□ 1.53
ZNF544-209ENST00000596929 ZCCHC6Q5VYS8 1495 aaKnown RBP24.62■■□□□ 1.53
ZNF544-209ENST00000596929 DCAF1Q9Y4B6 1507 aa24.59■■□□□ 1.53
ZNF544-209ENST00000596929 UNC13AQ9UPW8 1703 aa24.57■■□□□ 1.52
ZNF544-209ENST00000596929 BICRAQ9NZM4 1560 aa24.5■■□□□ 1.51
ZNF544-209ENST00000596929 SHROOM4Q9ULL8 1493 aa24.35■■□□□ 1.49
ZNF544-209ENST00000596929 SCRIBQ14160 1630 aa24.15■■□□□ 1.46
ZNF544-209ENST00000596929 CC2D2AQ9P2K1 1620 aa23.92■■□□□ 1.42
ZNF544-209ENST00000596929 EIF4G1Q04637 1599 aaKnown RBP23.91■■□□□ 1.42
ZNF544-209ENST00000596929 CECR2Q9BXF3 1484 aa23.87■■□□□ 1.41
ZNF544-209ENST00000596929 NCAPD3P42695 1498 aa23.24■■□□□ 1.31
ZNF544-209ENST00000596929 ATAD2BQ9ULI0 1458 aa23.13■■□□□ 1.29
ZNF544-209ENST00000596929 SMARCA2P51531 1590 aa23.1■■□□□ 1.29
ZNF544-209ENST00000596929 SMARCA4P51532 1647 aa23.09■■□□□ 1.29
ZNF544-209ENST00000596929 HMGXB3Q12766 1538 aa23.06■■□□□ 1.28
ZNF544-209ENST00000596929 BAZ1AQ9NRL2 1556 aaPredicted RBP23.05■■□□□ 1.28
ZNF544-209ENST00000596929 PEG3Q9GZU2 1588 aa22.94■■□□□ 1.26
ZNF544-209ENST00000596929 BAZ1BQ9UIG0 1483 aaKnown RBP22.91■■□□□ 1.26
ZNF544-209ENST00000596929 ERCC6Q03468 1493 aa22.89■■□□□ 1.25
ZNF544-209ENST00000596929 CUX2O14529 1486 aa22.88■■□□□ 1.25
ZNF544-209ENST00000596929 MROH2BQ7Z745 1585 aa22.81■■□□□ 1.24
ZNF544-209ENST00000596929 DNAJC5Q9H3Z4 198 aa22.76■■□□□ 1.23
ZNF544-209ENST00000596929 NESP48681 1621 aa22.72■■□□□ 1.23
ZNF544-209ENST00000596929 LAMC3Q9Y6N6 1575 aa22.67■■□□□ 1.22
ZNF544-209ENST00000596929 RSF1Q96T23 1441 aaPredicted RBP22.6■■□□□ 1.21
ZNF544-209ENST00000596929 PDS5BQ9NTI5 1447 aa22.57■■□□□ 1.2
ZNF544-209ENST00000596929 THOC2Q8NI27 1593 aaKnown RBP22.52■■□□□ 1.2
ZNF544-209ENST00000596929 CADPSQ9ULU8 1353 aa22.51■■□□□ 1.19
ZNF544-209ENST00000596929 WIZO95785 1651 aa22.49■■□□□ 1.19
ZNF544-209ENST00000596929 SUPT5HO00267 1087 aaKnown RBP22.41■■□□□ 1.18
ZNF544-209ENST00000596929 KIF21AQ7Z4S6 1674 aa22.41■■□□□ 1.18
ZNF544-209ENST00000596929 MRC2Q9UBG0 1479 aa22.34■■□□□ 1.17
ZNF544-209ENST00000596929 TOP2AP11388 1531 aaKnown RBP22.31■■□□□ 1.16
ZNF544-209ENST00000596929 CFTRP13569 1480 aa22.28■■□□□ 1.16
ZNF544-209ENST00000596929 WDR62O43379 1518 aa22.27■■□□□ 1.16
ZNF544-209ENST00000596929 CEP164Q9UPV0 1460 aa22.26■■□□□ 1.15
ZNF544-209ENST00000596929 FANCD2Q9BXW9 1451 aa22.23■■□□□ 1.15
ZNF544-209ENST00000596929 CCDC88BA6NC98 1476 aa22.03■■□□□ 1.12
ZNF544-209ENST00000596929 URB2Q14146 1524 aaKnown RBP22.01■■□□□ 1.11
ZNF544-209ENST00000596929 PRDM2Q13029 1718 aa21.97■■□□□ 1.11
ZNF544-209ENST00000596929 ABCC8Q09428 1581 aa21.85■■□□□ 1.09
ZNF544-209ENST00000596929 IFT140Q96RY7 1462 aa21.83■■□□□ 1.09
ZNF544-209ENST00000596929 OSCARQ8IYS5 282 aa21.82■■□□□ 1.08
ZNF544-209ENST00000596929 TOPBP1Q92547 1522 aa21.81■■□□□ 1.08
ZNF544-209ENST00000596929 DNMBPQ6XZF7 1577 aa21.74■■□□□ 1.07
ZNF544-209ENST00000596929 ZNF608Q9ULD9 1512 aaPredicted RBP21.71■■□□□ 1.07
ZNF544-209ENST00000596929 TRIM41Q8WV44 630 aa21.68■■□□□ 1.06
ZNF544-209ENST00000596929 EIF4G3O43432 1585 aaKnown RBP21.61■■□□□ 1.05
ZNF544-209ENST00000596929 TARBP1Q13395 1621 aaKnown RBP21.6■■□□□ 1.05
ZNF544-209ENST00000596929 POLA1P09884 1462 aaPredicted RBP21.59■■□□□ 1.05
ZNF544-209ENST00000596929 AQRO60306 1485 aaKnown RBP eCLIP21.53■■□□□ 1.046e-7■■■■■ 28.4
ZNF544-209ENST00000596929 SOGA1O94964 1423 aa21.51■■□□□ 1.03
ZNF544-209ENST00000596929 WDR97A6NE52 1622 aa21.47■■□□□ 1.03
ZNF544-209ENST00000596929 FGD5Q6ZNL6 1462 aa21.45■■□□□ 1.03
ZNF544-209ENST00000596929 RAD54L2Q9Y4B4 1467 aa21.45■■□□□ 1.03
ZNF544-209ENST00000596929 RIMBP3CA6NJZ7 1639 aa21.45■■□□□ 1.02
ZNF544-209ENST00000596929 RIMBP3BA6NNM3 1639 aa21.45■■□□□ 1.02
ZNF544-209ENST00000596929 RIMBP3Q9UFD9 1639 aa21.45■■□□□ 1.02
ZNF544-209ENST00000596929 ARHGEF11O15085 1522 aa21.44■■□□□ 1.02
ZNF544-209ENST00000596929 CUX1P39880 1505 aa21.43■■□□□ 1.02
ZNF544-209ENST00000596929 TDRD9Q8NDG6 1382 aaKnown RBP21.42■■□□□ 1.02
ZNF544-209ENST00000596929 CHD1O14646 1710 aa21.38■■□□□ 1.01
ZNF544-209ENST00000596929 FBLN2P98095 1184 aa21.37■■□□□ 1.01
ZNF544-209ENST00000596929 MAGI1Q96QZ7 1491 aaPredicted RBP21.35■■□□□ 1.01
ZNF544-209ENST00000596929 GRIN2BQ13224 1484 aa21.33■■□□□ 1.01
ZNF544-209ENST00000596929 SNAPC4Q5SXM2 1469 aa21.32■■□□□ 1
ZNF544-209ENST00000596929 CHIC1Q5VXU3 224 aa21.31■■□□□ 1
ZNF544-209ENST00000596929 WRNQ14191 1432 aaPredicted RBP eCLIP21.29■■□□□ 19e-6■■■■■ 50.1
ZNF544-209ENST00000596929 CHMP7Q8WUX9 453 aaPredicted RBP21.27■■□□□ 1
ZNF544-209ENST00000596929 ABCA10Q8WWZ4 1543 aa21.26■□□□□ 0.99
ZNF544-209ENST00000596929 SYNJ2O15056 1496 aa21.26■□□□□ 0.99
ZNF544-209ENST00000596929 CYB5RLQ6IPT4 315 aa21.25■□□□□ 0.99
ZNF544-209ENST00000596929 GAPVD1Q14C86 1478 aa21.24■□□□□ 0.99
ZNF544-209ENST00000596929 SYNJ1O43426 1573 aa21.23■□□□□ 0.99
ZNF544-209ENST00000596929 BIVM-ERCC5R4GMW8 1640 aa21.23■□□□□ 0.99
ZNF544-209ENST00000596929 CLASP1Q7Z460 1538 aa21.23■□□□□ 0.99
ZNF544-209ENST00000596929 TOP2BQ02880 1626 aa21.22■□□□□ 0.99
ZNF544-209ENST00000596929 ARAP1Q96P48 1450 aa21.21■□□□□ 0.99
ZNF544-209ENST00000596929 ABCA5Q8WWZ7 1642 aa21.18■□□□□ 0.98
ZNF544-209ENST00000596929 PBRM1Q86U86 1689 aa21.15■□□□□ 0.98
ZNF544-209ENST00000596929 GRIN2AQ12879 1464 aa21.05■□□□□ 0.96
ZNF544-209ENST00000596929 ADAMTS12P58397 1594 aa21.02■□□□□ 0.95
ZNF544-209ENST00000596929 FHAD1B1AJZ9 1412 aa21.01■□□□□ 0.95
ZNF544-209ENST00000596929 ERICH3Q5RHP9 1530 aa21■□□□□ 0.95
ZNF544-209ENST00000596929 NUP160Q12769 1436 aa20.99■□□□□ 0.95
ZNF544-209ENST00000596929 TRHP20396 242 aaPredicted RBP20.98■□□□□ 0.95
ZNF544-209ENST00000596929 CEP170Q5SW79 1584 aa20.92■□□□□ 0.94
ZNF544-209ENST00000596929 EEA1Q15075 1411 aa20.87■□□□□ 0.93
ZNF544-209ENST00000596929 SHROOM2Q13796 1616 aa20.86■□□□□ 0.93
ZNF544-209ENST00000596929 KIF27Q86VH2 1401 aa20.82■□□□□ 0.92
ZNF544-209ENST00000596929 ERCC6L2Q5T890 1561 aa20.81■□□□□ 0.92
ZNF544-209ENST00000596929 RUSC2Q8N2Y8 1516 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms