RNA–Protein interactions for RNA: ENST00000618925.1

MALAT1-214, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 5 BASIC

Gene MALAT1, Length 424 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-214ENST00000618925 AEBP2Q6ZN18 517 aaPredicted RBP24.81■■□□□ 1.56
MALAT1-214ENST00000618925 CHIC1Q5VXU3 224 aa24.27■■□□□ 1.48
MALAT1-214ENST00000618925 PHF23Q9BUL5 403 aaPredicted RBP21.37■■□□□ 1.01
MALAT1-214ENST00000618925 SENP3Q9H4L4 574 aaPredicted RBP21.01■□□□□ 0.95
MALAT1-214ENST00000618925 PLPPR3Q6T4P5 718 aa19.75■□□□□ 0.75
MALAT1-214ENST00000618925 FOXD1Q16676 465 aa19.52■□□□□ 0.72
MALAT1-214ENST00000618925 POTEDQ86YR6 584 aa18.92■□□□□ 0.62
MALAT1-214ENST00000618925 ADRA2BP18089 450 aa18.87■□□□□ 0.61
MALAT1-214ENST00000618925 PPP6R1Q9UPN7 881 aa18.85■□□□□ 0.61
MALAT1-214ENST00000618925 MSH5O43196 834 aa18.61■□□□□ 0.57
MALAT1-214ENST00000618925 PIAS4Q8N2W9 510 aaPredicted RBP18.46■□□□□ 0.55
MALAT1-214ENST00000618925 PPP4R3CPQ6ZMV5 832 aa17.44■□□□□ 0.38
MALAT1-214ENST00000618925 SCAF1Q9H7N4 1312 aaKnown RBP17.19■□□□□ 0.34
MALAT1-214ENST00000618925 KCNA4P22459 653 aa17.15■□□□□ 0.34
MALAT1-214ENST00000618925 MAPK8IP2Q13387 824 aaPredicted RBP17.09■□□□□ 0.33
MALAT1-214ENST00000618925 NCBP3Q53F19 620 aaKnown RBP16.97■□□□□ 0.31
MALAT1-214ENST00000618925 CNKSR2Q8WXI2 1034 aa16.9■□□□□ 0.3
MALAT1-214ENST00000618925 DMRT2Q9Y5R5 561 aa16.78■□□□□ 0.28
MALAT1-214ENST00000618925 NPM3O75607 178 aaKnown RBP16.76■□□□□ 0.27
MALAT1-214ENST00000618925 RNF216Q9NWF9 866 aaPredicted RBP16.53■□□□□ 0.24
MALAT1-214ENST00000618925 HOXD11P31277 338 aaPredicted RBP16.43■□□□□ 0.22
MALAT1-214ENST00000618925 SLC4A1APQ9BWU0 796 aaKnown RBP16.34■□□□□ 0.21
MALAT1-214ENST00000618925 CACNB1Q02641 598 aaPredicted RBP16.25■□□□□ 0.19
MALAT1-214ENST00000618925 DCAF8L1A6NGE4 600 aa16.18■□□□□ 0.18
MALAT1-214ENST00000618925 DNAJC5BQ9UF47 199 aa16.1■□□□□ 0.17
MALAT1-214ENST00000618925 EHMT2Q96KQ7 1210 aa16.05■□□□□ 0.16
MALAT1-214ENST00000618925 SLC4A2P04920 1241 aa15.79■□□□□ 0.12
MALAT1-214ENST00000618925 ZBTB22O15209 634 aa15.78■□□□□ 0.12
MALAT1-214ENST00000618925 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.74■□□□□ 0.11
MALAT1-214ENST00000618925 CSRNP3Q8WYN3 585 aa15.73■□□□□ 0.11
MALAT1-214ENST00000618925 FOXD4L1Q9NU39 408 aa15.73■□□□□ 0.11
MALAT1-214ENST00000618925 RNF39Q9H2S5 420 aa15.71■□□□□ 0.11
MALAT1-214ENST00000618925 C1QBPQ07021 282 aaKnown RBP15.55■□□□□ 0.08
MALAT1-214ENST00000618925 MYCNP04198 464 aaPredicted RBP15.48■□□□□ 0.07
MALAT1-214ENST00000618925 U3KPZ7 1027 aaPredicted RBP15.48■□□□□ 0.07
MALAT1-214ENST00000618925 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.25■□□□□ 0.03
MALAT1-214ENST00000618925 HNRNPUL2Q1KMD3 747 aaKnown RBP15.25■□□□□ 0.03
MALAT1-214ENST00000618925 SAMD1Q6SPF0 538 aaPredicted RBP15.22■□□□□ 0.03
MALAT1-214ENST00000618925 ATXN8OSP0DMR3 200 aa15.1■□□□□ 0.01
MALAT1-214ENST00000618925 APLP2Q06481 763 aa15.09■□□□□ 0.01
MALAT1-214ENST00000618925 ATF5Q9Y2D1 282 aaPredicted RBP15.09■□□□□ 0.01
MALAT1-214ENST00000618925 SPINK5Q9NQ38 1064 aaPredicted RBP15.06■□□□□ 0
MALAT1-214ENST00000618925 NISCHQ9Y2I1 1504 aa15.02□□□□□ -0.01
MALAT1-214ENST00000618925 CAPN15O75808 1086 aa15.01□□□□□ -0.01
MALAT1-214ENST00000618925 TRHP20396 242 aaPredicted RBP14.97□□□□□ -0.01
MALAT1-214ENST00000618925 ZNF219Q9P2Y4 722 aaPredicted RBP14.89□□□□□ -0.03
MALAT1-214ENST00000618925 POTEHQ6S545 545 aa14.78□□□□□ -0.04
MALAT1-214ENST00000618925 ABCB7O75027 752 aa14.76□□□□□ -0.05
MALAT1-214ENST00000618925 POLA2Q14181 598 aa14.69□□□□□ -0.06
MALAT1-214ENST00000618925 DSG3P32926 999 aa14.67□□□□□ -0.06
MALAT1-214ENST00000618925 FBLN2P98095 1184 aa14.43□□□□□ -0.1
MALAT1-214ENST00000618925 MKRN4PQ13434 485 aaPredicted RBP14.42□□□□□ -0.1
MALAT1-214ENST00000618925 ZBTB12Q9Y330 459 aaPredicted RBP14.41□□□□□ -0.1
MALAT1-214ENST00000618925 FKBP8Q14318 412 aa14.27□□□□□ -0.13
MALAT1-214ENST00000618925 OSCARQ8IYS5 282 aa14.23□□□□□ -0.13
MALAT1-214ENST00000618925 SPDYE4A6NLX3 237 aa14.14□□□□□ -0.15
MALAT1-214ENST00000618925 RBM42Q9BTD8 480 aaKnown RBP14.05□□□□□ -0.16
MALAT1-214ENST00000618925 SPDYE2BA6NHP3 402 aa14.04□□□□□ -0.16
MALAT1-214ENST00000618925 SPDYE6P0CI01 402 aa14.04□□□□□ -0.16
MALAT1-214ENST00000618925 SPDYE2Q495Y8 402 aa14.04□□□□□ -0.16
MALAT1-214ENST00000618925 ZNF692Q9BU19 519 aaPredicted RBP14.03□□□□□ -0.16
MALAT1-214ENST00000618925 SSUH2Q9Y2M2 353 aa13.93□□□□□ -0.18
MALAT1-214ENST00000618925 PABPN1Q86U42 306 aaKnown RBP eCLIP13.87□□□□□ -0.19
MALAT1-214ENST00000618925 PROM2Q8N271 834 aa13.84□□□□□ -0.19
MALAT1-214ENST00000618925 CHRDL2Q6WN34 429 aa13.83□□□□□ -0.2
MALAT1-214ENST00000618925 AKT1S1Q96B36 256 aa13.81□□□□□ -0.2
MALAT1-214ENST00000618925 REM2Q8IYK8 340 aaPredicted RBP13.7□□□□□ -0.22
MALAT1-214ENST00000618925 FBXO3Q9UK99 471 aa13.67□□□□□ -0.22
MALAT1-214ENST00000618925 CLEC11AQ9Y240 323 aa13.63□□□□□ -0.23
MALAT1-214ENST00000618925 SPDYE1Q8NFV5 336 aaPredicted RBP13.62□□□□□ -0.23
MALAT1-214ENST00000618925 SP7Q8TDD2 431 aaPredicted RBP13.61□□□□□ -0.23
MALAT1-214ENST00000618925 PITPNM1O00562 1244 aa13.58□□□□□ -0.24
MALAT1-214ENST00000618925 STAG3Q9UJ98 1225 aa13.58□□□□□ -0.24
MALAT1-214ENST00000618925 VASPP50552 380 aaPredicted RBP13.52□□□□□ -0.25
MALAT1-214ENST00000618925 PRR29P0C7W0 189 aa13.46□□□□□ -0.25
MALAT1-214ENST00000618925 PLCD3Q8N3E9 789 aa13.42□□□□□ -0.26
MALAT1-214ENST00000618925 CCDC180Q9P1Z9 1646 aa13.42□□□□□ -0.26
MALAT1-214ENST00000618925 MIER1Q8N108 512 aa13.41□□□□□ -0.26
MALAT1-214ENST00000618925 PIP4P2Q8N4L2 257 aa13.34□□□□□ -0.27
MALAT1-214ENST00000618925 IFNLR1Q8IU57 520 aaPredicted RBP13.33□□□□□ -0.28
MALAT1-214ENST00000618925 HAX1O00165 279 aa13.32□□□□□ -0.28
MALAT1-214ENST00000618925 PLEKHG5O94827 1062 aa13.32□□□□□ -0.28
MALAT1-214ENST00000618925 KLHL34Q8N239 644 aa13.31□□□□□ -0.28
MALAT1-214ENST00000618925 CREBZFQ9NS37 354 aa13.3□□□□□ -0.28
MALAT1-214ENST00000618925 CHADLQ6NUI6 762 aa13.29□□□□□ -0.28
MALAT1-214ENST00000618925 PRKAR2AP13861 404 aaKnown RBP13.24□□□□□ -0.29
MALAT1-214ENST00000618925 FXR2P51116 673 aaKnown RBP eCLIP13.24□□□□□ -0.29
MALAT1-214ENST00000618925 ZBTB47Q9UFB7 747 aaPredicted RBP13.2□□□□□ -0.3
MALAT1-214ENST00000618925 SPOCK2Q92563 424 aa13.16□□□□□ -0.3
MALAT1-214ENST00000618925 MNX1P50219 401 aaPredicted RBP13.15□□□□□ -0.3
MALAT1-214ENST00000618925 FARP1Q9Y4F1 1045 aaPredicted RBP13.11□□□□□ -0.31
MALAT1-214ENST00000618925 ABCC9O60706 1549 aa13.11□□□□□ -0.31
MALAT1-214ENST00000618925 RTN4Q9NQC3 1192 aaKnown RBP13.1□□□□□ -0.31
MALAT1-214ENST00000618925 EVX2Q03828 476 aa13.09□□□□□ -0.31
MALAT1-214ENST00000618925 AMER1Q5JTC6 1135 aaPredicted RBP13.09□□□□□ -0.31
MALAT1-214ENST00000618925 NPM1P06748 294 aaKnown RBP eCLIP13.07□□□□□ -0.32
MALAT1-214ENST00000618925 NUBP1P53384 320 aa13.02□□□□□ -0.33
MALAT1-214ENST00000618925 CIZ1Q9ULV3 898 aaPredicted RBP13□□□□□ -0.33
MALAT1-214ENST00000618925 RASEFQ8IZ41 740 aa12.99□□□□□ -0.33
MALAT1-214ENST00000618925 DCAF8Q5TAQ9 597 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms