RNA–Protein interactions for RNA: ENST00000596825.5

ZNF544-208, Transcript of zinc finger protein 544, humanhuman

TSL 1 (best) BASIC

Gene ZNF544, Length 3,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-208ENST00000596825 NISCHQ9Y2I1 1504 aa24.33■■□□□ 1.48
ZNF544-208ENST00000596825 DCAF8L2P0C7V8 631 aa22.6■■□□□ 1.21
ZNF544-208ENST00000596825 SHROOM4Q9ULL8 1493 aa22.55■■□□□ 1.2
ZNF544-208ENST00000596825 SUPT5HO00267 1087 aaKnown RBP22.24■■□□□ 1.15
ZNF544-208ENST00000596825 EHMT2Q96KQ7 1210 aa21.31■■□□□ 1
ZNF544-208ENST00000596825 FAM9AQ8IZU1 332 aaPredicted RBP20.84■□□□□ 0.93
ZNF544-208ENST00000596825 PCGF6Q9BYE7 350 aa20.79■□□□□ 0.92
ZNF544-208ENST00000596825 LOC105371045A0A1W2PR82 267 aa20.78■□□□□ 0.92
ZNF544-208ENST00000596825 CHIC1Q5VXU3 224 aa20.73■□□□□ 0.91
ZNF544-208ENST00000596825 PPARGC1BQ86YN6 1023 aaKnown RBP20.48■□□□□ 0.87
ZNF544-208ENST00000596825 TTBK1Q5TCY1 1321 aaPredicted RBP20.45■□□□□ 0.86
ZNF544-208ENST00000596825 ZCCHC6Q5VYS8 1495 aaKnown RBP20.36■□□□□ 0.85
ZNF544-208ENST00000596825 MYO15BQ96JP2 1530 aa20.34■□□□□ 0.85
ZNF544-208ENST00000596825 TRIM41Q8WV44 630 aa20.26■□□□□ 0.83
ZNF544-208ENST00000596825 ABCC9O60706 1549 aa20.22■□□□□ 0.83
ZNF544-208ENST00000596825 RANGAP1P46060 587 aaPredicted RBP20.03■□□□□ 0.8
ZNF544-208ENST00000596825 HRCP23327 699 aa20.01■□□□□ 0.79
ZNF544-208ENST00000596825 PABPN1Q86U42 306 aaKnown RBP eCLIP19.94■□□□□ 0.78
ZNF544-208ENST00000596825 SCRIBQ14160 1630 aa19.88■□□□□ 0.77
ZNF544-208ENST00000596825 CCDC180Q9P1Z9 1646 aa19.83■□□□□ 0.76
ZNF544-208ENST00000596825 TRIM26Q12899 539 aaPredicted RBP19.69■□□□□ 0.74
ZNF544-208ENST00000596825 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.6■□□□□ 0.73
ZNF544-208ENST00000596825 UBTFP17480 764 aaKnown RBP19.6■□□□□ 0.73
ZNF544-208ENST00000596825 RSF1Q96T23 1441 aaPredicted RBP19.59■□□□□ 0.73
ZNF544-208ENST00000596825 CECR2Q9BXF3 1484 aa19.56■□□□□ 0.72
ZNF544-208ENST00000596825 CCER1Q8TC90 406 aaPredicted RBP19.48■□□□□ 0.71
ZNF544-208ENST00000596825 RB1CC1Q8TDY2 1594 aa19.31■□□□□ 0.68
ZNF544-208ENST00000596825 HNRNPUL2Q1KMD3 747 aaKnown RBP19.3■□□□□ 0.68
ZNF544-208ENST00000596825 MROH2BQ7Z745 1585 aa19.22■□□□□ 0.67
ZNF544-208ENST00000596825 DCAF1Q9Y4B6 1507 aa19.15■□□□□ 0.66
ZNF544-208ENST00000596825 YTHDC1Q96MU7 727 aaKnown RBP19.15■□□□□ 0.66
ZNF544-208ENST00000596825 ITGAEP38570 1179 aa19.12■□□□□ 0.65
ZNF544-208ENST00000596825 ATP1B4Q9UN42 357 aaPredicted RBP19.11■□□□□ 0.65
ZNF544-208ENST00000596825 APLP2Q06481 763 aa19.09■□□□□ 0.65
ZNF544-208ENST00000596825 WIZO95785 1651 aa19.04■□□□□ 0.64
ZNF544-208ENST00000596825 CSRNP3Q8WYN3 585 aa19■□□□□ 0.63
ZNF544-208ENST00000596825 ZEB1P37275 1124 aaPredicted RBP19■□□□□ 0.63
ZNF544-208ENST00000596825 ABCC8Q09428 1581 aa18.99■□□□□ 0.63
ZNF544-208ENST00000596825 SOGA1O94964 1423 aa18.96■□□□□ 0.63
ZNF544-208ENST00000596825 CCDC88BA6NC98 1476 aa18.9■□□□□ 0.62
ZNF544-208ENST00000596825 RUSC2Q8N2Y8 1516 aa18.86■□□□□ 0.61
ZNF544-208ENST00000596825 P3H3Q8IVL6 736 aa18.83■□□□□ 0.6
ZNF544-208ENST00000596825 NACADO15069 1562 aa18.82■□□□□ 0.6
ZNF544-208ENST00000596825 DIEXFQ68CQ4 756 aaKnown RBP18.81■□□□□ 0.6
ZNF544-208ENST00000596825 CEP162Q5TB80 1403 aa18.69■□□□□ 0.58
ZNF544-208ENST00000596825 SCAF1Q9H7N4 1312 aaKnown RBP18.68■□□□□ 0.58
ZNF544-208ENST00000596825 NEUROD1Q13562 356 aa18.63■□□□□ 0.57
ZNF544-208ENST00000596825 ARID3CA6NKF2 412 aa18.62■□□□□ 0.57
ZNF544-208ENST00000596825 BAZ1AQ9NRL2 1556 aaPredicted RBP18.62■□□□□ 0.57
ZNF544-208ENST00000596825 GTF3C3Q9Y5Q9 886 aa18.57■□□□□ 0.56
ZNF544-208ENST00000596825 WRNQ14191 1432 aaPredicted RBP eCLIP18.56■□□□□ 0.569e-6■■■■■ 50.1
ZNF544-208ENST00000596825 FAM50AQ14320 339 aaKnown RBP18.5■□□□□ 0.55
ZNF544-208ENST00000596825 HIRIP3Q9BW71 556 aaPredicted RBP18.47■□□□□ 0.55
ZNF544-208ENST00000596825 KANK4Q5T7N3 995 aaPredicted RBP18.46■□□□□ 0.55
ZNF544-208ENST00000596825 CNGB1Q14028 1251 aaPredicted RBP18.45■□□□□ 0.54
ZNF544-208ENST00000596825 CENPBP07199 599 aaPredicted RBP18.45■□□□□ 0.54
ZNF544-208ENST00000596825 MIER1Q8N108 512 aa18.45■□□□□ 0.54
ZNF544-208ENST00000596825 CLIP1P30622 1438 aa18.45■□□□□ 0.54
ZNF544-208ENST00000596825 ZNF316A6NFI3 1004 aaPredicted RBP18.44■□□□□ 0.54
ZNF544-208ENST00000596825 BAZ1BQ9UIG0 1483 aaKnown RBP18.41■□□□□ 0.54
ZNF544-208ENST00000596825 SMARCA4P51532 1647 aa18.4■□□□□ 0.54
ZNF544-208ENST00000596825 TNIKQ9UKE5 1360 aa18.4■□□□□ 0.54
ZNF544-208ENST00000596825 ACIN1Q9UKV3 1341 aaKnown RBP18.38■□□□□ 0.53
ZNF544-208ENST00000596825 TOP2AP11388 1531 aaKnown RBP18.37■□□□□ 0.53
ZNF544-208ENST00000596825 SMARCA2P51531 1590 aa18.36■□□□□ 0.53
ZNF544-208ENST00000596825 RAPGEF2Q9Y4G8 1499 aa18.32■□□□□ 0.52
ZNF544-208ENST00000596825 GOLGA3Q08378 1498 aa18.31■□□□□ 0.52
ZNF544-208ENST00000596825 ATAD2BQ9ULI0 1458 aa18.26■□□□□ 0.51
ZNF544-208ENST00000596825 DNAJC5BQ9UF47 199 aa18.24■□□□□ 0.51
ZNF544-208ENST00000596825 BCANQ96GW7 911 aa18.2■□□□□ 0.5
ZNF544-208ENST00000596825 SIN3AQ96ST3 1273 aa18.2■□□□□ 0.5
ZNF544-208ENST00000596825 CHIC2Q9UKJ5 165 aa18.15■□□□□ 0.5
ZNF544-208ENST00000596825 CEP164Q9UPV0 1460 aa18.14■□□□□ 0.5
ZNF544-208ENST00000596825 SYNJ1O43426 1573 aa18.14■□□□□ 0.49
ZNF544-208ENST00000596825 BICRAQ9NZM4 1560 aa18.12■□□□□ 0.49
ZNF544-208ENST00000596825 FBLN2P98095 1184 aa18.12■□□□□ 0.49
ZNF544-208ENST00000596825 DDX10Q13206 875 aaKnown RBP18.11■□□□□ 0.49
ZNF544-208ENST00000596825 SENP3-EIF4A1A0A087X0R7 540 aa18.1■□□□□ 0.49
ZNF544-208ENST00000596825 KCNH8Q96L42 1107 aa18.1■□□□□ 0.49
ZNF544-208ENST00000596825 POLR3GLQ9BT43 218 aa18.09■□□□□ 0.49
ZNF544-208ENST00000596825 EEA1Q15075 1411 aa18.06■□□□□ 0.48
ZNF544-208ENST00000596825 UNC13AQ9UPW8 1703 aa18.06■□□□□ 0.48
ZNF544-208ENST00000596825 VPS8Q8N3P4 1428 aa18.04■□□□□ 0.48
ZNF544-208ENST00000596825 TRIM52Q96A61 297 aa18.03■□□□□ 0.48
ZNF544-208ENST00000596825 CUX2O14529 1486 aa18.02■□□□□ 0.48
ZNF544-208ENST00000596825 KIF27Q86VH2 1401 aa17.98■□□□□ 0.47
ZNF544-208ENST00000596825 RRP7BPQ9NSQ0 103 aa17.97■□□□□ 0.47
ZNF544-208ENST00000596825 TDRD9Q8NDG6 1382 aaKnown RBP17.96■□□□□ 0.47
ZNF544-208ENST00000596825 ZNF326Q5BKZ1 582 aaKnown RBP17.93■□□□□ 0.46
ZNF544-208ENST00000596825 CARMIL1Q5VZK9 1371 aa17.92■□□□□ 0.46
ZNF544-208ENST00000596825 EIF4G1Q04637 1599 aaKnown RBP17.91■□□□□ 0.46
ZNF544-208ENST00000596825 ZNF777Q9ULD5 760 aaPredicted RBP17.9■□□□□ 0.46
ZNF544-208ENST00000596825 FOXD1Q16676 465 aa17.89■□□□□ 0.45
ZNF544-208ENST00000596825 ARAP1Q96P48 1450 aa17.87■□□□□ 0.45
ZNF544-208ENST00000596825 KIF21BO75037 1637 aa17.86■□□□□ 0.45
ZNF544-208ENST00000596825 CCNB3Q8WWL7 1395 aa17.85■□□□□ 0.45
ZNF544-208ENST00000596825 RAD54L2Q9Y4B4 1467 aa17.84■□□□□ 0.45
ZNF544-208ENST00000596825 IGF1RP08069 1367 aa17.83■□□□□ 0.44
ZNF544-208ENST00000596825 FHOD3Q2V2M9 1422 aa17.83■□□□□ 0.44
ZNF544-208ENST00000596825 NESP48681 1621 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms