RNA–Protein interactions for RNA: ENST00000641437.1

MTHFR-211, Transcript of methylenetetrahydrofolate reductase, humanhuman

Gene MTHFR, Length 1,911 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFR-211ENST00000641437 NISCHQ9Y2I1 1504 aa37.42■■■■□ 3.58
MTHFR-211ENST00000641437 CCDC180Q9P1Z9 1646 aa32.68■■■□□ 2.82
MTHFR-211ENST00000641437 ZCCHC6Q5VYS8 1495 aaKnown RBP31.47■■■□□ 2.63
MTHFR-211ENST00000641437 DCAF1Q9Y4B6 1507 aa30.97■■■□□ 2.55
MTHFR-211ENST00000641437 ABCC9O60706 1549 aa30.77■■■□□ 2.52
MTHFR-211ENST00000641437 DCAF8L2P0C7V8 631 aa30.68■■■□□ 2.5
MTHFR-211ENST00000641437 MYO15BQ96JP2 1530 aa30.6■■■□□ 2.49
MTHFR-211ENST00000641437 SHROOM4Q9ULL8 1493 aa30.42■■■□□ 2.46
MTHFR-211ENST00000641437 NACADO15069 1562 aa30.37■■■□□ 2.45
MTHFR-211ENST00000641437 RB1CC1Q8TDY2 1594 aa30.1■■■□□ 2.41
MTHFR-211ENST00000641437 SCRIBQ14160 1630 aa30■■■□□ 2.39
MTHFR-211ENST00000641437 UNC13AQ9UPW8 1703 aa29.62■■■□□ 2.33
MTHFR-211ENST00000641437 BICRAQ9NZM4 1560 aa29.27■■■□□ 2.28
MTHFR-211ENST00000641437 SUPT5HO00267 1087 aaKnown RBP29.23■■■□□ 2.27
MTHFR-211ENST00000641437 CECR2Q9BXF3 1484 aa29.07■■■□□ 2.24
MTHFR-211ENST00000641437 RSF1Q96T23 1441 aaPredicted RBP29.01■■■□□ 2.24
MTHFR-211ENST00000641437 PABPN1Q86U42 306 aaKnown RBP eCLIP28.96■■■□□ 2.23
MTHFR-211ENST00000641437 MROH2BQ7Z745 1585 aa28.92■■■□□ 2.22
MTHFR-211ENST00000641437 BAZ1AQ9NRL2 1556 aaPredicted RBP28.88■■■□□ 2.21
MTHFR-211ENST00000641437 SMARCA4P51532 1647 aa28.79■■■□□ 2.2
MTHFR-211ENST00000641437 WIZO95785 1651 aa28.7■■■□□ 2.19
MTHFR-211ENST00000641437 PEG3Q9GZU2 1588 aa28.47■■■□□ 2.15
MTHFR-211ENST00000641437 TOP2AP11388 1531 aaKnown RBP28.39■■■□□ 2.13
MTHFR-211ENST00000641437 EIF4G1Q04637 1599 aaKnown RBP28.34■■■□□ 2.13
MTHFR-211ENST00000641437 ATAD2BQ9ULI0 1458 aa28.27■■■□□ 2.12
MTHFR-211ENST00000641437 SMARCA2P51531 1590 aa28.25■■■□□ 2.11
MTHFR-211ENST00000641437 BAZ1BQ9UIG0 1483 aaKnown RBP28.08■■■□□ 2.09
MTHFR-211ENST00000641437 CCDC88BA6NC98 1476 aa28.07■■■□□ 2.08
MTHFR-211ENST00000641437 CHIC1Q5VXU3 224 aa28.06■■■□□ 2.08
MTHFR-211ENST00000641437 HMGXB3Q12766 1538 aa28.02■■■□□ 2.08
MTHFR-211ENST00000641437 NCAPD3P42695 1498 aa28.02■■■□□ 2.08
MTHFR-211ENST00000641437 CC2D2AQ9P2K1 1620 aa27.91■■■□□ 2.06
MTHFR-211ENST00000641437 ABCC8Q09428 1581 aa27.51■■□□□ 1.99
MTHFR-211ENST00000641437 TRIM41Q8WV44 630 aa27.48■■□□□ 1.99
MTHFR-211ENST00000641437 CFTRP13569 1480 aa27.41■■□□□ 1.98
MTHFR-211ENST00000641437 PRDM2Q13029 1718 aa27.38■■□□□ 1.97
MTHFR-211ENST00000641437 WRNQ14191 1432 aaPredicted RBP eCLIP27.28■■□□□ 1.96
MTHFR-211ENST00000641437 CADPSQ9ULU8 1353 aa27.26■■□□□ 1.95
MTHFR-211ENST00000641437 SYNJ1O43426 1573 aa27.24■■□□□ 1.95
MTHFR-211ENST00000641437 DNAJC5BQ9UF47 199 aa27.16■■□□□ 1.94
MTHFR-211ENST00000641437 BIVM-ERCC5R4GMW8 1640 aa27.13■■□□□ 1.93
MTHFR-211ENST00000641437 TOP2BQ02880 1626 aa27.12■■□□□ 1.93
MTHFR-211ENST00000641437 LAMC3Q9Y6N6 1575 aa27.08■■□□□ 1.93
MTHFR-211ENST00000641437 NESP48681 1621 aa27.07■■□□□ 1.92
MTHFR-211ENST00000641437 CUX1P39880 1505 aa27.04■■□□□ 1.92
MTHFR-211ENST00000641437 FANCD2Q9BXW9 1451 aa26.98■■□□□ 1.91
MTHFR-211ENST00000641437 FAM9AQ8IZU1 332 aaPredicted RBP26.96■■□□□ 1.91
MTHFR-211ENST00000641437 SOGA1O94964 1423 aa26.96■■□□□ 1.91
MTHFR-211ENST00000641437 LOC105371045A0A1W2PR82 267 aa26.95■■□□□ 1.9
MTHFR-211ENST00000641437 EEA1Q15075 1411 aa26.89■■□□□ 1.89
MTHFR-211ENST00000641437 RUSC2Q8N2Y8 1516 aa26.88■■□□□ 1.89
MTHFR-211ENST00000641437 CEP164Q9UPV0 1460 aa26.81■■□□□ 1.88
MTHFR-211ENST00000641437 KIF21AQ7Z4S6 1674 aa26.8■■□□□ 1.88
MTHFR-211ENST00000641437 PDS5BQ9NTI5 1447 aa26.79■■□□□ 1.88
MTHFR-211ENST00000641437 DNMBPQ6XZF7 1577 aa26.79■■□□□ 1.88
MTHFR-211ENST00000641437 TOPBP1Q92547 1522 aa26.72■■□□□ 1.87
MTHFR-211ENST00000641437 FGD5Q6ZNL6 1462 aa26.71■■□□□ 1.87
MTHFR-211ENST00000641437 URB2Q14146 1524 aaKnown RBP26.69■■□□□ 1.86
MTHFR-211ENST00000641437 CSRNP3Q8WYN3 585 aa26.69■■□□□ 1.86
MTHFR-211ENST00000641437 KIF21BO75037 1637 aa26.62■■□□□ 1.85
MTHFR-211ENST00000641437 POLA1P09884 1462 aaPredicted RBP26.59■■□□□ 1.85
MTHFR-211ENST00000641437 KIF27Q86VH2 1401 aa26.57■■□□□ 1.84
MTHFR-211ENST00000641437 EHMT2Q96KQ7 1210 aa26.56■■□□□ 1.84
MTHFR-211ENST00000641437 GOLGA3Q08378 1498 aa26.53■■□□□ 1.84
MTHFR-211ENST00000641437 CUX2O14529 1486 aa26.51■■□□□ 1.83
MTHFR-211ENST00000641437 WDR97A6NE52 1622 aa26.5■■□□□ 1.83
MTHFR-211ENST00000641437 MRC2Q9UBG0 1479 aa26.5■■□□□ 1.83
MTHFR-211ENST00000641437 ABCA10Q8WWZ4 1543 aa26.49■■□□□ 1.83
MTHFR-211ENST00000641437 RAD54L2Q9Y4B4 1467 aa26.49■■□□□ 1.83
MTHFR-211ENST00000641437 PRXQ9BXM0 1461 aa26.46■■□□□ 1.83
MTHFR-211ENST00000641437 TNIKQ9UKE5 1360 aa26.43■■□□□ 1.82
MTHFR-211ENST00000641437 RAPGEF2Q9Y4G8 1499 aa26.42■■□□□ 1.82
MTHFR-211ENST00000641437 ERICH3Q5RHP9 1530 aa26.42■■□□□ 1.82
MTHFR-211ENST00000641437 WDR62O43379 1518 aa26.41■■□□□ 1.82
MTHFR-211ENST00000641437 TARBP1Q13395 1621 aaKnown RBP26.37■■□□□ 1.81
MTHFR-211ENST00000641437 THOC2Q8NI27 1593 aaKnown RBP26.36■■□□□ 1.81
MTHFR-211ENST00000641437 IGF1RP08069 1367 aa26.34■■□□□ 1.81
MTHFR-211ENST00000641437 ERCC6Q03468 1493 aa26.34■■□□□ 1.81
MTHFR-211ENST00000641437 ABCA5Q8WWZ7 1642 aa26.33■■□□□ 1.81
MTHFR-211ENST00000641437 CEP162Q5TB80 1403 aa26.31■■□□□ 1.8
MTHFR-211ENST00000641437 UBTFP17480 764 aaKnown RBP26.29■■□□□ 1.8
MTHFR-211ENST00000641437 CUL7Q14999 1698 aa26.21■■□□□ 1.79
MTHFR-211ENST00000641437 CARMIL1Q5VZK9 1371 aa26.19■■□□□ 1.78
MTHFR-211ENST00000641437 GAPVD1Q14C86 1478 aa26.18■■□□□ 1.78
MTHFR-211ENST00000641437 TDRD9Q8NDG6 1382 aaKnown RBP26.18■■□□□ 1.78
MTHFR-211ENST00000641437 IFT140Q96RY7 1462 aa26.16■■□□□ 1.78
MTHFR-211ENST00000641437 PBRM1Q86U86 1689 aa26.13■■□□□ 1.77
MTHFR-211ENST00000641437 CLIP1P30622 1438 aa26.08■■□□□ 1.77
MTHFR-211ENST00000641437 ZNF608Q9ULD9 1512 aaPredicted RBP26.05■■□□□ 1.76
MTHFR-211ENST00000641437 AQRO60306 1485 aaKnown RBP eCLIP26.03■■□□□ 1.761e-6■□□□□ 11.2
MTHFR-211ENST00000641437 EIF4G3O43432 1585 aaKnown RBP26■■□□□ 1.75
MTHFR-211ENST00000641437 GRIN2BQ13224 1484 aa25.97■■□□□ 1.75
MTHFR-211ENST00000641437 ADAMTS12P58397 1594 aa25.97■■□□□ 1.75
MTHFR-211ENST00000641437 CTTNBP2Q8WZ74 1663 aa25.95■■□□□ 1.75
MTHFR-211ENST00000641437 ARAP1Q96P48 1450 aa25.9■■□□□ 1.74
MTHFR-211ENST00000641437 FHAD1B1AJZ9 1412 aa25.89■■□□□ 1.74
MTHFR-211ENST00000641437 VPS8Q8N3P4 1428 aa25.88■■□□□ 1.73
MTHFR-211ENST00000641437 ARHGAP35Q9NRY4 1499 aa25.88■■□□□ 1.73
MTHFR-211ENST00000641437 RANGAP1P46060 587 aaPredicted RBP25.84■■□□□ 1.73
MTHFR-211ENST00000641437 SNAPC4Q5SXM2 1469 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms