RNA–Protein interactions for RNA: ENST00000600775.5

ZNF544-218, Transcript of zinc finger protein 544, humanhuman

TSL 4

Gene ZNF544, Length 533 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-218ENST00000600775 NISCHQ9Y2I1 1504 aa29.61■■■□□ 2.33
ZNF544-218ENST00000600775 CCDC180Q9P1Z9 1646 aa26.47■■□□□ 1.83
ZNF544-218ENST00000600775 ABCC9O60706 1549 aa26.19■■□□□ 1.78
ZNF544-218ENST00000600775 RB1CC1Q8TDY2 1594 aa25.06■■□□□ 1.6
ZNF544-218ENST00000600775 DCAF8L2P0C7V8 631 aa24.98■■□□□ 1.59
ZNF544-218ENST00000600775 NACADO15069 1562 aa24.94■■□□□ 1.58
ZNF544-218ENST00000600775 MYO15BQ96JP2 1530 aa24.66■■□□□ 1.54
ZNF544-218ENST00000600775 ZCCHC6Q5VYS8 1495 aaKnown RBP24.62■■□□□ 1.53
ZNF544-218ENST00000600775 UNC13AQ9UPW8 1703 aa24.54■■□□□ 1.52
ZNF544-218ENST00000600775 DCAF1Q9Y4B6 1507 aa24.45■■□□□ 1.51
ZNF544-218ENST00000600775 PABPN1Q86U42 306 aaKnown RBP eCLIP24.45■■□□□ 1.5
ZNF544-218ENST00000600775 DNAJC5BQ9UF47 199 aa24.3■■□□□ 1.48
ZNF544-218ENST00000600775 BICRAQ9NZM4 1560 aa24.29■■□□□ 1.48
ZNF544-218ENST00000600775 SCRIBQ14160 1630 aa24.15■■□□□ 1.46
ZNF544-218ENST00000600775 SHROOM4Q9ULL8 1493 aa23.96■■□□□ 1.43
ZNF544-218ENST00000600775 EIF4G1Q04637 1599 aaKnown RBP23.68■■□□□ 1.38
ZNF544-218ENST00000600775 CC2D2AQ9P2K1 1620 aa23.67■■□□□ 1.38
ZNF544-218ENST00000600775 CECR2Q9BXF3 1484 aa23.56■■□□□ 1.36
ZNF544-218ENST00000600775 SMARCA4P51532 1647 aa23.05■■□□□ 1.28
ZNF544-218ENST00000600775 NCAPD3P42695 1498 aa23■■□□□ 1.27
ZNF544-218ENST00000600775 ATAD2BQ9ULI0 1458 aa22.98■■□□□ 1.27
ZNF544-218ENST00000600775 BAZ1AQ9NRL2 1556 aaPredicted RBP22.97■■□□□ 1.27
ZNF544-218ENST00000600775 SMARCA2P51531 1590 aa22.95■■□□□ 1.26
ZNF544-218ENST00000600775 HMGXB3Q12766 1538 aa22.86■■□□□ 1.25
ZNF544-218ENST00000600775 MROH2BQ7Z745 1585 aa22.83■■□□□ 1.25
ZNF544-218ENST00000600775 BAZ1BQ9UIG0 1483 aaKnown RBP22.79■■□□□ 1.24
ZNF544-218ENST00000600775 PEG3Q9GZU2 1588 aa22.79■■□□□ 1.24
ZNF544-218ENST00000600775 WIZO95785 1651 aa22.61■■□□□ 1.21
ZNF544-218ENST00000600775 ERCC6Q03468 1493 aa22.6■■□□□ 1.21
ZNF544-218ENST00000600775 RSF1Q96T23 1441 aaPredicted RBP22.6■■□□□ 1.21
ZNF544-218ENST00000600775 NESP48681 1621 aa22.58■■□□□ 1.21
ZNF544-218ENST00000600775 LAMC3Q9Y6N6 1575 aa22.46■■□□□ 1.19
ZNF544-218ENST00000600775 CUX2O14529 1486 aa22.42■■□□□ 1.18
ZNF544-218ENST00000600775 SUPT5HO00267 1087 aaKnown RBP22.41■■□□□ 1.18
ZNF544-218ENST00000600775 KIF21AQ7Z4S6 1674 aa22.33■■□□□ 1.17
ZNF544-218ENST00000600775 CADPSQ9ULU8 1353 aa22.33■■□□□ 1.17
ZNF544-218ENST00000600775 PDS5BQ9NTI5 1447 aa22.32■■□□□ 1.16
ZNF544-218ENST00000600775 TOP2AP11388 1531 aaKnown RBP22.3■■□□□ 1.16
ZNF544-218ENST00000600775 THOC2Q8NI27 1593 aaKnown RBP22.27■■□□□ 1.16
ZNF544-218ENST00000600775 CFTRP13569 1480 aa22.12■■□□□ 1.13
ZNF544-218ENST00000600775 DNAJC5Q9H3Z4 198 aa22.11■■□□□ 1.13
ZNF544-218ENST00000600775 MRC2Q9UBG0 1479 aa22.1■■□□□ 1.13
ZNF544-218ENST00000600775 FANCD2Q9BXW9 1451 aa22.09■■□□□ 1.13
ZNF544-218ENST00000600775 CEP164Q9UPV0 1460 aa22.09■■□□□ 1.13
ZNF544-218ENST00000600775 CCDC88BA6NC98 1476 aa22.06■■□□□ 1.12
ZNF544-218ENST00000600775 WDR62O43379 1518 aa22.02■■□□□ 1.12
ZNF544-218ENST00000600775 PRDM2Q13029 1718 aa22■■□□□ 1.11
ZNF544-218ENST00000600775 URB2Q14146 1524 aaKnown RBP21.88■■□□□ 1.09
ZNF544-218ENST00000600775 TOPBP1Q92547 1522 aa21.7■■□□□ 1.06
ZNF544-218ENST00000600775 ABCC8Q09428 1581 aa21.7■■□□□ 1.06
ZNF544-218ENST00000600775 DNMBPQ6XZF7 1577 aa21.65■■□□□ 1.06
ZNF544-218ENST00000600775 IFT140Q96RY7 1462 aa21.63■■□□□ 1.05
ZNF544-218ENST00000600775 ZNF608Q9ULD9 1512 aaPredicted RBP21.56■■□□□ 1.04
ZNF544-218ENST00000600775 OSCARQ8IYS5 282 aa21.5■■□□□ 1.03
ZNF544-218ENST00000600775 TARBP1Q13395 1621 aaKnown RBP21.49■■□□□ 1.03
ZNF544-218ENST00000600775 POLA1P09884 1462 aaPredicted RBP21.49■■□□□ 1.03
ZNF544-218ENST00000600775 EIF4G3O43432 1585 aaKnown RBP21.47■■□□□ 1.03
ZNF544-218ENST00000600775 SOGA1O94964 1423 aa21.43■■□□□ 1.02
ZNF544-218ENST00000600775 CUX1P39880 1505 aa21.43■■□□□ 1.02
ZNF544-218ENST00000600775 AQRO60306 1485 aaKnown RBP eCLIP21.42■■□□□ 1.026e-7■■■■■ 28.4
ZNF544-218ENST00000600775 RAD54L2Q9Y4B4 1467 aa21.42■■□□□ 1.02
ZNF544-218ENST00000600775 FGD5Q6ZNL6 1462 aa21.4■■□□□ 1.02
ZNF544-218ENST00000600775 TDRD9Q8NDG6 1382 aaKnown RBP21.35■■□□□ 1.01
ZNF544-218ENST00000600775 CHIC1Q5VXU3 224 aa21.31■■□□□ 1
ZNF544-218ENST00000600775 TRIM41Q8WV44 630 aa21.31■■□□□ 1
ZNF544-218ENST00000600775 CHD1O14646 1710 aa21.3■■□□□ 1
ZNF544-218ENST00000600775 WRNQ14191 1432 aaPredicted RBP eCLIP21.29■■□□□ 1
ZNF544-218ENST00000600775 FBLN2P98095 1184 aa21.28■■□□□ 1
ZNF544-218ENST00000600775 WDR97A6NE52 1622 aa21.28■■□□□ 1
ZNF544-218ENST00000600775 BIVM-ERCC5R4GMW8 1640 aa21.23■□□□□ 0.99
ZNF544-218ENST00000600775 SYNJ1O43426 1573 aa21.23■□□□□ 0.99
ZNF544-218ENST00000600775 TOP2BQ02880 1626 aa21.22■□□□□ 0.99
ZNF544-218ENST00000600775 SNAPC4Q5SXM2 1469 aa21.2■□□□□ 0.98
ZNF544-218ENST00000600775 GRIN2BQ13224 1484 aa21.19■□□□□ 0.98
ZNF544-218ENST00000600775 RIMBP3CA6NJZ7 1639 aa21.18■□□□□ 0.98
ZNF544-218ENST00000600775 RIMBP3BA6NNM3 1639 aa21.18■□□□□ 0.98
ZNF544-218ENST00000600775 RIMBP3Q9UFD9 1639 aa21.18■□□□□ 0.98
ZNF544-218ENST00000600775 PBRM1Q86U86 1689 aa21.17■□□□□ 0.98
ZNF544-218ENST00000600775 ABCA10Q8WWZ4 1543 aa21.16■□□□□ 0.98
ZNF544-218ENST00000600775 GAPVD1Q14C86 1478 aa21.16■□□□□ 0.98
ZNF544-218ENST00000600775 MAGI1Q96QZ7 1491 aaPredicted RBP21.15■□□□□ 0.98
ZNF544-218ENST00000600775 CHMP7Q8WUX9 453 aaPredicted RBP21.15■□□□□ 0.98
ZNF544-218ENST00000600775 ABCA5Q8WWZ7 1642 aa21.11■□□□□ 0.97
ZNF544-218ENST00000600775 ARHGEF11O15085 1522 aa21.11■□□□□ 0.97
ZNF544-218ENST00000600775 SYNJ2O15056 1496 aa21.07■□□□□ 0.96
ZNF544-218ENST00000600775 CLASP1Q7Z460 1538 aa20.99■□□□□ 0.95
ZNF544-218ENST00000600775 CYB5RLQ6IPT4 315 aa20.99■□□□□ 0.95
ZNF544-218ENST00000600775 ADAMTS12P58397 1594 aa20.93■□□□□ 0.94
ZNF544-218ENST00000600775 GRIN2AQ12879 1464 aa20.91■□□□□ 0.94
ZNF544-218ENST00000600775 ERICH3Q5RHP9 1530 aa20.91■□□□□ 0.94
ZNF544-218ENST00000600775 ARAP1Q96P48 1450 aa20.91■□□□□ 0.94
ZNF544-218ENST00000600775 FHAD1B1AJZ9 1412 aa20.89■□□□□ 0.94
ZNF544-218ENST00000600775 EEA1Q15075 1411 aa20.87■□□□□ 0.93
ZNF544-218ENST00000600775 CEP170Q5SW79 1584 aa20.83■□□□□ 0.92
ZNF544-218ENST00000600775 KIF27Q86VH2 1401 aa20.82■□□□□ 0.92
ZNF544-218ENST00000600775 NUP160Q12769 1436 aa20.8■□□□□ 0.92
ZNF544-218ENST00000600775 RUSC2Q8N2Y8 1516 aa20.76■□□□□ 0.91
ZNF544-218ENST00000600775 IGF1RP08069 1367 aa20.72■□□□□ 0.91
ZNF544-218ENST00000600775 ERCC6L2Q5T890 1561 aa20.72■□□□□ 0.91
ZNF544-218ENST00000600775 SHROOM2Q13796 1616 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms