Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.93■□□□□ 0.94
CMTM3Q96MX0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CMTM3Q96MX0 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
CMTM3Q96MX0 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.93■□□□□ 0.94
CMTM3Q96MX0 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.93■□□□□ 0.94
CMTM3Q96MX0 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CMTM3Q96MX0 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CMTM3Q96MX0 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.92■□□□□ 0.94
CMTM3Q96MX0 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CMTM3Q96MX0 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CMTM3Q96MX0 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CMTM3Q96MX0 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CMTM3Q96MX0 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CMTM3Q96MX0 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
CMTM3Q96MX0 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CMTM3Q96MX0 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CMTM3Q96MX0 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.91■□□□□ 0.94
CMTM3Q96MX0 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CMTM3Q96MX0 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.91■□□□□ 0.94
CMTM3Q96MX0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CMTM3Q96MX0 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CMTM3Q96MX0 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.9■□□□□ 0.94
CMTM3Q96MX0 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CMTM3Q96MX0 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.9■□□□□ 0.94
CMTM3Q96MX0 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CMTM3Q96MX0 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CMTM3Q96MX0 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CMTM3Q96MX0 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CMTM3Q96MX0 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CMTM3Q96MX0 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CMTM3Q96MX0 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CMTM3Q96MX0 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CMTM3Q96MX0 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CMTM3Q96MX0 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.89■□□□□ 0.93
CMTM3Q96MX0 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CMTM3Q96MX0 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CMTM3Q96MX0 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CMTM3Q96MX0 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.88■□□□□ 0.93
CMTM3Q96MX0 AP003733.4-201ENST00000623785 1697 ntBASIC20.88■□□□□ 0.93
CMTM3Q96MX0 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.88■□□□□ 0.93
CMTM3Q96MX0 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CMTM3Q96MX0 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.88■□□□□ 0.93
CMTM3Q96MX0 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CMTM3Q96MX0 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CMTM3Q96MX0 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CMTM3Q96MX0 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CMTM3Q96MX0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CMTM3Q96MX0 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.87■□□□□ 0.93
CMTM3Q96MX0 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CMTM3Q96MX0 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CMTM3Q96MX0 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CMTM3Q96MX0 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.86■□□□□ 0.93
CMTM3Q96MX0 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CMTM3Q96MX0 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.86■□□□□ 0.93
CMTM3Q96MX0 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.86■□□□□ 0.93
CMTM3Q96MX0 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CMTM3Q96MX0 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
CMTM3Q96MX0 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.85■□□□□ 0.93
CMTM3Q96MX0 AC133561.1-201ENST00000568600 2415 ntBASIC20.85■□□□□ 0.93
CMTM3Q96MX0 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
CMTM3Q96MX0 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.85■□□□□ 0.93
CMTM3Q96MX0 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
CMTM3Q96MX0 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CMTM3Q96MX0 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CMTM3Q96MX0 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CMTM3Q96MX0 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CMTM3Q96MX0 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CMTM3Q96MX0 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.84■□□□□ 0.93
CMTM3Q96MX0 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CMTM3Q96MX0 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CMTM3Q96MX0 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CMTM3Q96MX0 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CMTM3Q96MX0 AC110285.7-201ENST00000624417 1536 ntBASIC20.83■□□□□ 0.93
CMTM3Q96MX0 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.93
CMTM3Q96MX0 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CMTM3Q96MX0 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CMTM3Q96MX0 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CMTM3Q96MX0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CMTM3Q96MX0 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.83■□□□□ 0.92
CMTM3Q96MX0 AC096887.2-201ENST00000623443 1957 ntBASIC20.83■□□□□ 0.92
CMTM3Q96MX0 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CMTM3Q96MX0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.82■□□□□ 0.92
CMTM3Q96MX0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CMTM3Q96MX0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.82■□□□□ 0.92
CMTM3Q96MX0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.82■□□□□ 0.92
CMTM3Q96MX0 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.82■□□□□ 0.92
CMTM3Q96MX0 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CMTM3Q96MX0 MIR6090-201ENST00000622481 60 ntBASIC20.82■□□□□ 0.92
CMTM3Q96MX0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CMTM3Q96MX0 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
CMTM3Q96MX0 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CMTM3Q96MX0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.82■□□□□ 0.92
CMTM3Q96MX0 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CMTM3Q96MX0 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.82■□□□□ 0.92
CMTM3Q96MX0 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CMTM3Q96MX0 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CMTM3Q96MX0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CMTM3Q96MX0 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CMTM3Q96MX0 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.81■□□□□ 0.92
CMTM3Q96MX0 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms