Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC30.4■■■□□ 2.46
SSH3Q8TE77 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
SSH3Q8TE77 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC30.39■■■□□ 2.46
SSH3Q8TE77 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC30.39■■■□□ 2.46
SSH3Q8TE77 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
SSH3Q8TE77 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC30.39■■■□□ 2.46
SSH3Q8TE77 MIR3960-201ENST00000583311 91 ntBASIC30.39■■■□□ 2.46
SSH3Q8TE77 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC30.39■■■□□ 2.45
SSH3Q8TE77 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC30.39■■■□□ 2.45
SSH3Q8TE77 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC30.38■■■□□ 2.45
SSH3Q8TE77 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
SSH3Q8TE77 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
SSH3Q8TE77 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
SSH3Q8TE77 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC30.37■■■□□ 2.45
SSH3Q8TE77 RP9P-202ENST00000450133 1212 ntBASIC30.36■■■□□ 2.45
SSH3Q8TE77 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC30.35■■■□□ 2.45
SSH3Q8TE77 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
SSH3Q8TE77 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
SSH3Q8TE77 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC30.33■■■□□ 2.45
SSH3Q8TE77 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
SSH3Q8TE77 GFER-205ENST00000569451 517 ntTSL 5 BASIC30.33■■■□□ 2.45
SSH3Q8TE77 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
SSH3Q8TE77 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
SSH3Q8TE77 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
SSH3Q8TE77 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC30.32■■■□□ 2.44
SSH3Q8TE77 AC093536.1-201ENST00000569153 554 ntBASIC30.32■■■□□ 2.44
SSH3Q8TE77 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC30.32■■■□□ 2.44
SSH3Q8TE77 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SSH3Q8TE77 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SSH3Q8TE77 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
SSH3Q8TE77 AC026202.3-201ENST00000600805 1127 ntBASIC30.3■■■□□ 2.44
SSH3Q8TE77 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
SSH3Q8TE77 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
SSH3Q8TE77 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC30.3■■■□□ 2.44
SSH3Q8TE77 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC30.29■■■□□ 2.44
SSH3Q8TE77 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SSH3Q8TE77 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
SSH3Q8TE77 RAP2CP1-202ENST00000605179 643 ntBASIC30.29■■■□□ 2.44
SSH3Q8TE77 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
SSH3Q8TE77 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC30.28■■■□□ 2.44
SSH3Q8TE77 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
SSH3Q8TE77 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
SSH3Q8TE77 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
SSH3Q8TE77 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
SSH3Q8TE77 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
SSH3Q8TE77 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC30.27■■■□□ 2.44
SSH3Q8TE77 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
SSH3Q8TE77 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
SSH3Q8TE77 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
SSH3Q8TE77 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
SSH3Q8TE77 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC30.27■■■□□ 2.44
SSH3Q8TE77 HYI-213ENST00000583037 1322 ntTSL 5 BASIC30.26■■■□□ 2.44
SSH3Q8TE77 AC009831.1-201ENST00000580420 1582 ntBASIC30.26■■■□□ 2.43
SSH3Q8TE77 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC30.25■■■□□ 2.43
SSH3Q8TE77 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
SSH3Q8TE77 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
SSH3Q8TE77 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
SSH3Q8TE77 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC30.25■■■□□ 2.43
SSH3Q8TE77 ABHD17AP5-201ENST00000580133 923 ntBASIC30.25■■■□□ 2.43
SSH3Q8TE77 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC30.25■■■□□ 2.43
SSH3Q8TE77 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC30.25■■■□□ 2.43
SSH3Q8TE77 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC30.25■■■□□ 2.43
SSH3Q8TE77 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
SSH3Q8TE77 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC30.24■■■□□ 2.43
SSH3Q8TE77 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC30.24■■■□□ 2.43
SSH3Q8TE77 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SSH3Q8TE77 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
SSH3Q8TE77 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
SSH3Q8TE77 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC30.23■■■□□ 2.43
SSH3Q8TE77 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
SSH3Q8TE77 U85056.1-201ENST00000616429 682 ntBASIC30.22■■■□□ 2.43
SSH3Q8TE77 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC30.21■■■□□ 2.43
SSH3Q8TE77 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
SSH3Q8TE77 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC30.21■■■□□ 2.43
SSH3Q8TE77 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC30.21■■■□□ 2.43
SSH3Q8TE77 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
SSH3Q8TE77 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
SSH3Q8TE77 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC30.2■■■□□ 2.43
SSH3Q8TE77 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC30.2■■■□□ 2.43
SSH3Q8TE77 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
SSH3Q8TE77 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
SSH3Q8TE77 AC133552.2-201ENST00000619106 1032 ntBASIC30.19■■■□□ 2.42
SSH3Q8TE77 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
SSH3Q8TE77 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SSH3Q8TE77 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SSH3Q8TE77 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
SSH3Q8TE77 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
SSH3Q8TE77 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC30.17■■■□□ 2.42
SSH3Q8TE77 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
SSH3Q8TE77 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC30.17■■■□□ 2.42
SSH3Q8TE77 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC30.17■■■□□ 2.42
SSH3Q8TE77 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
SSH3Q8TE77 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC30.15■■■□□ 2.42
SSH3Q8TE77 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC30.15■■■□□ 2.42
SSH3Q8TE77 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
SSH3Q8TE77 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
SSH3Q8TE77 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
SSH3Q8TE77 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
SSH3Q8TE77 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
SSH3Q8TE77 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC30.14■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms