Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RAB42Q8N4Z0 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.69■■□□□ 1.38
RAB42Q8N4Z0 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RAB42Q8N4Z0 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RAB42Q8N4Z0 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RAB42Q8N4Z0 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
RAB42Q8N4Z0 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.68■■□□□ 1.38
RAB42Q8N4Z0 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
RAB42Q8N4Z0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
RAB42Q8N4Z0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RAB42Q8N4Z0 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.67■■□□□ 1.38
RAB42Q8N4Z0 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RAB42Q8N4Z0 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.66■■□□□ 1.38
RAB42Q8N4Z0 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.66■■□□□ 1.38
RAB42Q8N4Z0 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RAB42Q8N4Z0 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RAB42Q8N4Z0 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RAB42Q8N4Z0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.66■■□□□ 1.38
RAB42Q8N4Z0 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RAB42Q8N4Z0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
RAB42Q8N4Z0 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RAB42Q8N4Z0 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.65■■□□□ 1.38
RAB42Q8N4Z0 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RAB42Q8N4Z0 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.65■■□□□ 1.38
RAB42Q8N4Z0 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
RAB42Q8N4Z0 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.65■■□□□ 1.38
RAB42Q8N4Z0 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.65■■□□□ 1.38
RAB42Q8N4Z0 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.64■■□□□ 1.37
RAB42Q8N4Z0 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RAB42Q8N4Z0 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RAB42Q8N4Z0 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.64■■□□□ 1.37
RAB42Q8N4Z0 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.63■■□□□ 1.37
RAB42Q8N4Z0 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
RAB42Q8N4Z0 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
RAB42Q8N4Z0 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
RAB42Q8N4Z0 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
RAB42Q8N4Z0 AC093536.1-201ENST00000569153 554 ntBASIC23.63■■□□□ 1.37
RAB42Q8N4Z0 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RAB42Q8N4Z0 ABHD17AP5-201ENST00000580133 923 ntBASIC23.62■■□□□ 1.37
RAB42Q8N4Z0 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
RAB42Q8N4Z0 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
RAB42Q8N4Z0 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
RAB42Q8N4Z0 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RAB42Q8N4Z0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.61■■□□□ 1.37
RAB42Q8N4Z0 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
RAB42Q8N4Z0 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.61■■□□□ 1.37
RAB42Q8N4Z0 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
RAB42Q8N4Z0 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.61■■□□□ 1.37
RAB42Q8N4Z0 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.6■■□□□ 1.37
RAB42Q8N4Z0 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
RAB42Q8N4Z0 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RAB42Q8N4Z0 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RAB42Q8N4Z0 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.6■■□□□ 1.37
RAB42Q8N4Z0 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.6■■□□□ 1.37
RAB42Q8N4Z0 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
RAB42Q8N4Z0 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RAB42Q8N4Z0 HYI-213ENST00000583037 1322 ntTSL 5 BASIC23.59■■□□□ 1.37
RAB42Q8N4Z0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
RAB42Q8N4Z0 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RAB42Q8N4Z0 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RAB42Q8N4Z0 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RAB42Q8N4Z0 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RAB42Q8N4Z0 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.58■■□□□ 1.37
RAB42Q8N4Z0 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RAB42Q8N4Z0 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
RAB42Q8N4Z0 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
RAB42Q8N4Z0 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RAB42Q8N4Z0 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RAB42Q8N4Z0 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RAB42Q8N4Z0 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
RAB42Q8N4Z0 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RAB42Q8N4Z0 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.57■■□□□ 1.36
RAB42Q8N4Z0 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
RAB42Q8N4Z0 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
RAB42Q8N4Z0 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
RAB42Q8N4Z0 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
RAB42Q8N4Z0 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RAB42Q8N4Z0 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RAB42Q8N4Z0 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RAB42Q8N4Z0 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RAB42Q8N4Z0 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.55■■□□□ 1.36
RAB42Q8N4Z0 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RAB42Q8N4Z0 AC026202.3-201ENST00000600805 1127 ntBASIC23.55■■□□□ 1.36
RAB42Q8N4Z0 AC133552.2-201ENST00000619106 1032 ntBASIC23.55■■□□□ 1.36
RAB42Q8N4Z0 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RAB42Q8N4Z0 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
RAB42Q8N4Z0 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RAB42Q8N4Z0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.55■■□□□ 1.36
RAB42Q8N4Z0 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC23.54■■□□□ 1.36
RAB42Q8N4Z0 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RAB42Q8N4Z0 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RAB42Q8N4Z0 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RAB42Q8N4Z0 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RAB42Q8N4Z0 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.53■■□□□ 1.36
RAB42Q8N4Z0 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.53■■□□□ 1.36
RAB42Q8N4Z0 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RAB42Q8N4Z0 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RAB42Q8N4Z0 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.53■■□□□ 1.36
RAB42Q8N4Z0 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RAB42Q8N4Z0 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms