Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CHPFQ8IZ52 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC24.88■■□□□ 1.57
CHPFQ8IZ52 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CHPFQ8IZ52 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CHPFQ8IZ52 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CHPFQ8IZ52 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CHPFQ8IZ52 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.87■■□□□ 1.57
CHPFQ8IZ52 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CHPFQ8IZ52 AL451085.2-201ENST00000605085 799 ntBASIC24.87■■□□□ 1.57
CHPFQ8IZ52 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
CHPFQ8IZ52 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CHPFQ8IZ52 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC24.87■■□□□ 1.57
CHPFQ8IZ52 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
CHPFQ8IZ52 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CHPFQ8IZ52 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.86■■□□□ 1.57
CHPFQ8IZ52 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CHPFQ8IZ52 AL035685.1-201ENST00000636663 812 ntBASIC24.86■■□□□ 1.57
CHPFQ8IZ52 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CHPFQ8IZ52 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHPFQ8IZ52 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CHPFQ8IZ52 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CHPFQ8IZ52 IDNK-203ENST00000405990 629 ntTSL 2 BASIC24.85■■□□□ 1.57
CHPFQ8IZ52 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC24.85■■□□□ 1.57
CHPFQ8IZ52 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.85■■□□□ 1.57
CHPFQ8IZ52 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
CHPFQ8IZ52 YBX1P4-201ENST00000392794 808 ntBASIC24.84■■□□□ 1.57
CHPFQ8IZ52 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
CHPFQ8IZ52 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CHPFQ8IZ52 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CHPFQ8IZ52 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CHPFQ8IZ52 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CHPFQ8IZ52 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CHPFQ8IZ52 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CHPFQ8IZ52 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
CHPFQ8IZ52 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
CHPFQ8IZ52 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CHPFQ8IZ52 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CHPFQ8IZ52 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24.82■■□□□ 1.56
CHPFQ8IZ52 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
CHPFQ8IZ52 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
CHPFQ8IZ52 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CHPFQ8IZ52 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CHPFQ8IZ52 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CHPFQ8IZ52 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC24.81■■□□□ 1.56
CHPFQ8IZ52 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC24.81■■□□□ 1.56
CHPFQ8IZ52 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC24.81■■□□□ 1.56
CHPFQ8IZ52 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
CHPFQ8IZ52 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CHPFQ8IZ52 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CHPFQ8IZ52 PVT1_1.1-201ENST00000615125 194 ntBASIC24.8■■□□□ 1.56
CHPFQ8IZ52 AL449106.1-201ENST00000608517 1980 ntBASIC24.8■■□□□ 1.56
CHPFQ8IZ52 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CHPFQ8IZ52 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
CHPFQ8IZ52 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC24.79■■□□□ 1.56
CHPFQ8IZ52 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC24.79■■□□□ 1.56
CHPFQ8IZ52 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.79■■□□□ 1.56
CHPFQ8IZ52 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
CHPFQ8IZ52 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC24.78■■□□□ 1.56
CHPFQ8IZ52 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.78■■□□□ 1.56
CHPFQ8IZ52 AC103834.1-201ENST00000520383 144 ntBASIC24.78■■□□□ 1.56
CHPFQ8IZ52 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CHPFQ8IZ52 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CHPFQ8IZ52 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.78■■□□□ 1.56
CHPFQ8IZ52 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CHPFQ8IZ52 LINC01003-201ENST00000564834 1764 ntBASIC24.77■■□□□ 1.56
CHPFQ8IZ52 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC24.77■■□□□ 1.56
CHPFQ8IZ52 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC24.76■■□□□ 1.55
CHPFQ8IZ52 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
CHPFQ8IZ52 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC24.76■■□□□ 1.55
CHPFQ8IZ52 TRIR-205ENST00000592273 783 ntTSL 3 BASIC24.76■■□□□ 1.55
CHPFQ8IZ52 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
CHPFQ8IZ52 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
CHPFQ8IZ52 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC24.75■■□□□ 1.55
CHPFQ8IZ52 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
CHPFQ8IZ52 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CHPFQ8IZ52 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.75■■□□□ 1.55
CHPFQ8IZ52 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CHPFQ8IZ52 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC24.74■■□□□ 1.55
CHPFQ8IZ52 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
CHPFQ8IZ52 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CHPFQ8IZ52 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CHPFQ8IZ52 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CHPFQ8IZ52 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
CHPFQ8IZ52 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
CHPFQ8IZ52 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CHPFQ8IZ52 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.73■■□□□ 1.55
CHPFQ8IZ52 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CHPFQ8IZ52 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CHPFQ8IZ52 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
CHPFQ8IZ52 IDNK-201ENST00000376417 511 ntTSL 5 BASIC24.72■■□□□ 1.55
CHPFQ8IZ52 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CHPFQ8IZ52 MTX2-204ENST00000443241 799 ntTSL 3 BASIC24.72■■□□□ 1.55
CHPFQ8IZ52 MIR4508-201ENST00000584178 70 ntBASIC24.72■■□□□ 1.55
CHPFQ8IZ52 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CHPFQ8IZ52 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CHPFQ8IZ52 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC24.71■■□□□ 1.55
CHPFQ8IZ52 AC009299.2-201ENST00000482477 511 ntBASIC24.71■■□□□ 1.55
CHPFQ8IZ52 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
CHPFQ8IZ52 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CHPFQ8IZ52 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.7■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms