Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC25.59■■□□□ 1.69
DENND4AQ7Z401 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
DENND4AQ7Z401 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
DENND4AQ7Z401 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC25.59■■□□□ 1.69
DENND4AQ7Z401 AL139393.2-201ENST00000608721 2025 ntBASIC25.59■■□□□ 1.69
DENND4AQ7Z401 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
DENND4AQ7Z401 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
DENND4AQ7Z401 AC087393.1-201ENST00000582896 145 ntBASIC25.58■■□□□ 1.69
DENND4AQ7Z401 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
DENND4AQ7Z401 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
DENND4AQ7Z401 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC25.57■■□□□ 1.68
DENND4AQ7Z401 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC25.57■■□□□ 1.68
DENND4AQ7Z401 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
DENND4AQ7Z401 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
DENND4AQ7Z401 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC25.57■■□□□ 1.68
DENND4AQ7Z401 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
DENND4AQ7Z401 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC25.57■■□□□ 1.68
DENND4AQ7Z401 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
DENND4AQ7Z401 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.56■■□□□ 1.68
DENND4AQ7Z401 GRAMD4P7-201ENST00000578182 1232 ntBASIC25.56■■□□□ 1.68
DENND4AQ7Z401 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.56■■□□□ 1.68
DENND4AQ7Z401 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
DENND4AQ7Z401 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.56■■□□□ 1.68
DENND4AQ7Z401 ABCB10P1-201ENST00000614297 2181 ntBASIC25.56■■□□□ 1.68
DENND4AQ7Z401 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
DENND4AQ7Z401 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
DENND4AQ7Z401 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.55■■□□□ 1.68
DENND4AQ7Z401 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
DENND4AQ7Z401 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
DENND4AQ7Z401 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC25.54■■□□□ 1.68
DENND4AQ7Z401 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
DENND4AQ7Z401 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
DENND4AQ7Z401 CREM-229ENST00000474362 1030 ntTSL 2 BASIC25.53■■□□□ 1.68
DENND4AQ7Z401 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
DENND4AQ7Z401 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
DENND4AQ7Z401 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
DENND4AQ7Z401 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC25.53■■□□□ 1.68
DENND4AQ7Z401 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
DENND4AQ7Z401 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
DENND4AQ7Z401 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
DENND4AQ7Z401 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
DENND4AQ7Z401 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC25.52■■□□□ 1.68
DENND4AQ7Z401 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC25.52■■□□□ 1.68
DENND4AQ7Z401 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC25.51■■□□□ 1.67
DENND4AQ7Z401 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC25.51■■□□□ 1.67
DENND4AQ7Z401 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
DENND4AQ7Z401 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
DENND4AQ7Z401 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.51■■□□□ 1.67
DENND4AQ7Z401 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
DENND4AQ7Z401 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
DENND4AQ7Z401 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.5■■□□□ 1.67
DENND4AQ7Z401 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
DENND4AQ7Z401 AC239859.2-201ENST00000444165 318 ntBASIC25.5■■□□□ 1.67
DENND4AQ7Z401 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
DENND4AQ7Z401 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.5■■□□□ 1.67
DENND4AQ7Z401 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
DENND4AQ7Z401 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC25.49■■□□□ 1.67
DENND4AQ7Z401 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.49■■□□□ 1.67
DENND4AQ7Z401 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.49■■□□□ 1.67
DENND4AQ7Z401 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC25.49■■□□□ 1.67
DENND4AQ7Z401 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
DENND4AQ7Z401 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.48■■□□□ 1.67
DENND4AQ7Z401 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
DENND4AQ7Z401 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC25.48■■□□□ 1.67
DENND4AQ7Z401 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
DENND4AQ7Z401 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
DENND4AQ7Z401 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
DENND4AQ7Z401 RPS2P7-201ENST00000447334 885 ntBASIC25.47■■□□□ 1.67
DENND4AQ7Z401 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
DENND4AQ7Z401 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
DENND4AQ7Z401 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC25.47■■□□□ 1.67
DENND4AQ7Z401 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
DENND4AQ7Z401 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
DENND4AQ7Z401 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.46■■□□□ 1.67
DENND4AQ7Z401 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
DENND4AQ7Z401 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC25.45■■□□□ 1.67
DENND4AQ7Z401 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
DENND4AQ7Z401 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC25.44■■□□□ 1.66
DENND4AQ7Z401 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
DENND4AQ7Z401 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC25.44■■□□□ 1.66
DENND4AQ7Z401 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
DENND4AQ7Z401 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
DENND4AQ7Z401 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC25.44■■□□□ 1.66
DENND4AQ7Z401 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.43■■□□□ 1.66
DENND4AQ7Z401 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.43■■□□□ 1.66
DENND4AQ7Z401 BX664725.1-201ENST00000438252 379 ntBASIC25.43■■□□□ 1.66
DENND4AQ7Z401 KRT16P3-201ENST00000439127 1283 ntBASIC25.43■■□□□ 1.66
DENND4AQ7Z401 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
DENND4AQ7Z401 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC25.43■■□□□ 1.66
DENND4AQ7Z401 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
DENND4AQ7Z401 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
DENND4AQ7Z401 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC25.43■■□□□ 1.66
DENND4AQ7Z401 UNC93B8-201ENST00000511903 705 ntBASIC25.43■■□□□ 1.66
DENND4AQ7Z401 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC25.43■■□□□ 1.66
DENND4AQ7Z401 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
DENND4AQ7Z401 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
DENND4AQ7Z401 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
DENND4AQ7Z401 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC25.41■■□□□ 1.66
DENND4AQ7Z401 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
DENND4AQ7Z401 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms