Protein–RNA interactions for Protein: Q15599

SLC9A3R2, Na(+)/H(+) exchange regulatory cofactor NHE-RF2, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R2Q15599 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC9A3R2Q15599 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SLC9A3R2Q15599 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SLC9A3R2Q15599 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC9A3R2Q15599 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC9A3R2Q15599 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC9A3R2Q15599 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.72■□□□□ 0.91
SLC9A3R2Q15599 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC9A3R2Q15599 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
SLC9A3R2Q15599 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.71■□□□□ 0.91
SLC9A3R2Q15599 DUSP8P4-201ENST00000399538 1761 ntBASIC20.71■□□□□ 0.91
SLC9A3R2Q15599 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.71■□□□□ 0.91
SLC9A3R2Q15599 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC9A3R2Q15599 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC9A3R2Q15599 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.71■□□□□ 0.91
SLC9A3R2Q15599 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC9A3R2Q15599 AC092803.2-201ENST00000564287 1899 ntBASIC20.71■□□□□ 0.91
SLC9A3R2Q15599 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC9A3R2Q15599 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
SLC9A3R2Q15599 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC9A3R2Q15599 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SLC9A3R2Q15599 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SLC9A3R2Q15599 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.7■□□□□ 0.9
SLC9A3R2Q15599 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC9A3R2Q15599 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.69■□□□□ 0.9
SLC9A3R2Q15599 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SLC9A3R2Q15599 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SLC9A3R2Q15599 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC9A3R2Q15599 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLC9A3R2Q15599 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.68■□□□□ 0.9
SLC9A3R2Q15599 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLC9A3R2Q15599 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SLC9A3R2Q15599 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC9A3R2Q15599 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SLC9A3R2Q15599 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.68■□□□□ 0.9
SLC9A3R2Q15599 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC9A3R2Q15599 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLC9A3R2Q15599 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLC9A3R2Q15599 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.67■□□□□ 0.9
SLC9A3R2Q15599 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC9A3R2Q15599 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC9A3R2Q15599 RNF126P1-201ENST00000567452 1320 ntBASIC20.67■□□□□ 0.9
SLC9A3R2Q15599 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC9A3R2Q15599 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.67■□□□□ 0.9
SLC9A3R2Q15599 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SLC9A3R2Q15599 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC9A3R2Q15599 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC9A3R2Q15599 ABHD17AP5-201ENST00000580133 923 ntBASIC20.66■□□□□ 0.9
SLC9A3R2Q15599 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC9A3R2Q15599 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC9A3R2Q15599 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC9A3R2Q15599 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.64■□□□□ 0.9
SLC9A3R2Q15599 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SLC9A3R2Q15599 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SLC9A3R2Q15599 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SLC9A3R2Q15599 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.64■□□□□ 0.89
SLC9A3R2Q15599 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC9A3R2Q15599 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC9A3R2Q15599 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLC9A3R2Q15599 AC008813.1-201ENST00000536597 885 ntBASIC20.64■□□□□ 0.89
SLC9A3R2Q15599 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.64■□□□□ 0.89
SLC9A3R2Q15599 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
SLC9A3R2Q15599 AC135983.2-203ENST00000454486 1613 ntBASIC20.64■□□□□ 0.89
SLC9A3R2Q15599 WHAMMP2-203ENST00000563942 1603 ntBASIC20.64■□□□□ 0.89
SLC9A3R2Q15599 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC9A3R2Q15599 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC9A3R2Q15599 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC9A3R2Q15599 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
SLC9A3R2Q15599 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC9A3R2Q15599 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
SLC9A3R2Q15599 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC9A3R2Q15599 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SLC9A3R2Q15599 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC9A3R2Q15599 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC9A3R2Q15599 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SLC9A3R2Q15599 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC9A3R2Q15599 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC9A3R2Q15599 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
SLC9A3R2Q15599 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SLC9A3R2Q15599 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC9A3R2Q15599 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.61■□□□□ 0.89
SLC9A3R2Q15599 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC9A3R2Q15599 AC022413.1-201ENST00000624602 984 ntBASIC20.61■□□□□ 0.89
SLC9A3R2Q15599 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC9A3R2Q15599 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC9A3R2Q15599 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC9A3R2Q15599 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC9A3R2Q15599 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SLC9A3R2Q15599 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC9A3R2Q15599 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.6■□□□□ 0.89
SLC9A3R2Q15599 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC9A3R2Q15599 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.6■□□□□ 0.89
SLC9A3R2Q15599 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC9A3R2Q15599 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.59■□□□□ 0.89
SLC9A3R2Q15599 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC9A3R2Q15599 AP004609.3-201ENST00000610705 1884 ntBASIC20.59■□□□□ 0.89
SLC9A3R2Q15599 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.59■□□□□ 0.89
SLC9A3R2Q15599 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SLC9A3R2Q15599 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC9A3R2Q15599 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms