Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC27.38■■□□□ 1.97
CPT1AP50416 AC087393.1-201ENST00000582896 145 ntBASIC27.38■■□□□ 1.97
CPT1AP50416 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CPT1AP50416 AC103724.3-201ENST00000564481 992 ntBASIC27.37■■□□□ 1.97
CPT1AP50416 AL031848.2-201ENST00000607670 837 ntBASIC27.37■■□□□ 1.97
CPT1AP50416 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC27.37■■□□□ 1.97
CPT1AP50416 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
CPT1AP50416 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CPT1AP50416 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CPT1AP50416 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CPT1AP50416 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
CPT1AP50416 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC27.35■■□□□ 1.97
CPT1AP50416 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CPT1AP50416 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CPT1AP50416 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
CPT1AP50416 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
CPT1AP50416 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CPT1AP50416 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
CPT1AP50416 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CPT1AP50416 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
CPT1AP50416 OR2A1-AS1-204ENST00000470435 602 ntBASIC27.33■■□□□ 1.97
CPT1AP50416 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
CPT1AP50416 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
CPT1AP50416 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
CPT1AP50416 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
CPT1AP50416 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CPT1AP50416 RPS2P7-201ENST00000447334 885 ntBASIC27.32■■□□□ 1.96
CPT1AP50416 PRTG-204ENST00000561292 833 ntTSL 3 BASIC27.32■■□□□ 1.96
CPT1AP50416 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CPT1AP50416 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CPT1AP50416 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CPT1AP50416 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC27.31■■□□□ 1.96
CPT1AP50416 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC27.31■■□□□ 1.96
CPT1AP50416 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC27.31■■□□□ 1.96
CPT1AP50416 GUSBP5-201ENST00000418136 578 ntBASIC27.31■■□□□ 1.96
CPT1AP50416 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
CPT1AP50416 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CPT1AP50416 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
CPT1AP50416 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CPT1AP50416 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CPT1AP50416 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC27.3■■□□□ 1.96
CPT1AP50416 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CPT1AP50416 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC27.3■■□□□ 1.96
CPT1AP50416 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
CPT1AP50416 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
CPT1AP50416 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
CPT1AP50416 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
CPT1AP50416 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC27.29■■□□□ 1.96
CPT1AP50416 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC27.29■■□□□ 1.96
CPT1AP50416 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CPT1AP50416 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
CPT1AP50416 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CPT1AP50416 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
CPT1AP50416 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC27.28■■□□□ 1.96
CPT1AP50416 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CPT1AP50416 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CPT1AP50416 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CPT1AP50416 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CPT1AP50416 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
CPT1AP50416 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
CPT1AP50416 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CPT1AP50416 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
CPT1AP50416 LONRF2P2-201ENST00000439212 571 ntBASIC27.26■■□□□ 1.95
CPT1AP50416 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC27.26■■□□□ 1.95
CPT1AP50416 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CPT1AP50416 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC27.26■■□□□ 1.95
CPT1AP50416 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC27.26■■□□□ 1.95
CPT1AP50416 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
CPT1AP50416 AL449106.1-201ENST00000608517 1980 ntBASIC27.26■■□□□ 1.95
CPT1AP50416 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC27.25■■□□□ 1.95
CPT1AP50416 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CPT1AP50416 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC27.25■■□□□ 1.95
CPT1AP50416 DRD5P2-201ENST00000421395 2012 ntBASIC27.25■■□□□ 1.95
CPT1AP50416 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC27.25■■□□□ 1.95
CPT1AP50416 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC27.25■■□□□ 1.95
CPT1AP50416 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CPT1AP50416 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC27.24■■□□□ 1.95
CPT1AP50416 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CPT1AP50416 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
CPT1AP50416 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
CPT1AP50416 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC27.23■■□□□ 1.95
CPT1AP50416 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CPT1AP50416 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CPT1AP50416 KRT18P10-201ENST00000388836 1287 ntBASIC27.23■■□□□ 1.95
CPT1AP50416 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC27.23■■□□□ 1.95
CPT1AP50416 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC27.23■■□□□ 1.95
CPT1AP50416 AC131212.1-201ENST00000613771 668 ntBASIC27.23■■□□□ 1.95
CPT1AP50416 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
CPT1AP50416 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CPT1AP50416 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CPT1AP50416 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CPT1AP50416 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC27.21■■□□□ 1.95
CPT1AP50416 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
CPT1AP50416 AL592295.1-201ENST00000400984 884 ntBASIC27.21■■□□□ 1.95
CPT1AP50416 RNF146-205ENST00000477776 762 ntTSL 3 BASIC27.21■■□□□ 1.95
CPT1AP50416 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
CPT1AP50416 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
CPT1AP50416 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
CPT1AP50416 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC27.2■■□□□ 1.94
CPT1AP50416 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms