Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.2■□□□□ 0.66
PF4V1P10720 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PF4V1P10720 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PF4V1P10720 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PF4V1P10720 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PF4V1P10720 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.2■□□□□ 0.66
PF4V1P10720 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PF4V1P10720 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
PF4V1P10720 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PF4V1P10720 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
PF4V1P10720 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PF4V1P10720 AP004609.3-201ENST00000610705 1884 ntBASIC19.19■□□□□ 0.66
PF4V1P10720 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PF4V1P10720 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PF4V1P10720 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PF4V1P10720 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.18■□□□□ 0.66
PF4V1P10720 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PF4V1P10720 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PF4V1P10720 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PF4V1P10720 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.18■□□□□ 0.66
PF4V1P10720 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PF4V1P10720 AL592293.1-201ENST00000502889 1188 ntBASIC19.18■□□□□ 0.66
PF4V1P10720 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PF4V1P10720 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
PF4V1P10720 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.18■□□□□ 0.66
PF4V1P10720 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PF4V1P10720 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PF4V1P10720 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PF4V1P10720 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.17■□□□□ 0.66
PF4V1P10720 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.17■□□□□ 0.66
PF4V1P10720 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.17■□□□□ 0.66
PF4V1P10720 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.17■□□□□ 0.66
PF4V1P10720 AC009831.1-201ENST00000580420 1582 ntBASIC19.17■□□□□ 0.66
PF4V1P10720 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PF4V1P10720 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PF4V1P10720 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PF4V1P10720 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PF4V1P10720 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PF4V1P10720 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PF4V1P10720 AC129492.7-201ENST00000622992 756 ntBASIC19.16■□□□□ 0.66
PF4V1P10720 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PF4V1P10720 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PF4V1P10720 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PF4V1P10720 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PF4V1P10720 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PF4V1P10720 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PF4V1P10720 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.15■□□□□ 0.66
PF4V1P10720 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PF4V1P10720 AC142472.1-201ENST00000612013 1741 ntBASIC19.15■□□□□ 0.66
PF4V1P10720 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.15■□□□□ 0.66
PF4V1P10720 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PF4V1P10720 DUX4L18-201ENST00000553347 1267 ntBASIC19.15■□□□□ 0.66
PF4V1P10720 AC025884.2-201ENST00000553429 711 ntBASIC19.15■□□□□ 0.66
PF4V1P10720 MIR3960-201ENST00000583311 91 ntBASIC19.15■□□□□ 0.66
PF4V1P10720 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PF4V1P10720 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
PF4V1P10720 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PF4V1P10720 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PF4V1P10720 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.14■□□□□ 0.65
PF4V1P10720 RP9P-202ENST00000450133 1212 ntBASIC19.14■□□□□ 0.65
PF4V1P10720 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.14■□□□□ 0.65
PF4V1P10720 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PF4V1P10720 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.14■□□□□ 0.65
PF4V1P10720 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.14■□□□□ 0.65
PF4V1P10720 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PF4V1P10720 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PF4V1P10720 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PF4V1P10720 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.14■□□□□ 0.65
PF4V1P10720 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PF4V1P10720 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PF4V1P10720 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PF4V1P10720 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.13■□□□□ 0.65
PF4V1P10720 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.13■□□□□ 0.65
PF4V1P10720 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PF4V1P10720 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PF4V1P10720 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PF4V1P10720 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PF4V1P10720 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PF4V1P10720 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PF4V1P10720 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PF4V1P10720 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
PF4V1P10720 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PF4V1P10720 AC093536.1-201ENST00000569153 554 ntBASIC19.11■□□□□ 0.65
PF4V1P10720 BHLHE23-202ENST00000612929 1109 ntBASIC19.11■□□□□ 0.65
PF4V1P10720 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.11■□□□□ 0.65
PF4V1P10720 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PF4V1P10720 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PF4V1P10720 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PF4V1P10720 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PF4V1P10720 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PF4V1P10720 RARRES2P1-201ENST00000474487 481 ntBASIC19.1■□□□□ 0.65
PF4V1P10720 AC026202.3-201ENST00000600805 1127 ntBASIC19.1■□□□□ 0.65
PF4V1P10720 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
PF4V1P10720 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PF4V1P10720 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.1■□□□□ 0.65
PF4V1P10720 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PF4V1P10720 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PF4V1P10720 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PF4V1P10720 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.09■□□□□ 0.65
PF4V1P10720 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms