Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RAB40ALP0C0E4 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.02■■□□□ 1.28
RAB40ALP0C0E4 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
RAB40ALP0C0E4 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
RAB40ALP0C0E4 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
RAB40ALP0C0E4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.02■■□□□ 1.28
RAB40ALP0C0E4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.02■■□□□ 1.28
RAB40ALP0C0E4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RAB40ALP0C0E4 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
RAB40ALP0C0E4 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RAB40ALP0C0E4 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RAB40ALP0C0E4 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RAB40ALP0C0E4 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
RAB40ALP0C0E4 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.01■■□□□ 1.27
RAB40ALP0C0E4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.01■■□□□ 1.27
RAB40ALP0C0E4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.01■■□□□ 1.27
RAB40ALP0C0E4 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RAB40ALP0C0E4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RAB40ALP0C0E4 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23■■□□□ 1.27
RAB40ALP0C0E4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC23■■□□□ 1.27
RAB40ALP0C0E4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23■■□□□ 1.27
RAB40ALP0C0E4 AC010980.1-201ENST00000587192 1142 ntBASIC23■■□□□ 1.27
RAB40ALP0C0E4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RAB40ALP0C0E4 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RAB40ALP0C0E4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC22.99■■□□□ 1.27
RAB40ALP0C0E4 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RAB40ALP0C0E4 DRD5P2-201ENST00000421395 2012 ntBASIC22.99■■□□□ 1.27
RAB40ALP0C0E4 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC22.99■■□□□ 1.27
RAB40ALP0C0E4 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RAB40ALP0C0E4 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RAB40ALP0C0E4 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.98■■□□□ 1.27
RAB40ALP0C0E4 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RAB40ALP0C0E4 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RAB40ALP0C0E4 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
RAB40ALP0C0E4 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RAB40ALP0C0E4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RAB40ALP0C0E4 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RAB40ALP0C0E4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RAB40ALP0C0E4 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RAB40ALP0C0E4 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RAB40ALP0C0E4 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
RAB40ALP0C0E4 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RAB40ALP0C0E4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22.96■■□□□ 1.27
RAB40ALP0C0E4 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
RAB40ALP0C0E4 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
RAB40ALP0C0E4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC22.96■■□□□ 1.27
RAB40ALP0C0E4 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RAB40ALP0C0E4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RAB40ALP0C0E4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.95■■□□□ 1.26
RAB40ALP0C0E4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RAB40ALP0C0E4 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22.94■■□□□ 1.26
RAB40ALP0C0E4 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC22.94■■□□□ 1.26
RAB40ALP0C0E4 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
RAB40ALP0C0E4 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RAB40ALP0C0E4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RAB40ALP0C0E4 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RAB40ALP0C0E4 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC22.93■■□□□ 1.26
RAB40ALP0C0E4 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
RAB40ALP0C0E4 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
RAB40ALP0C0E4 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
RAB40ALP0C0E4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.93■■□□□ 1.26
RAB40ALP0C0E4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC22.93■■□□□ 1.26
RAB40ALP0C0E4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.93■■□□□ 1.26
RAB40ALP0C0E4 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC22.93■■□□□ 1.26
RAB40ALP0C0E4 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC22.92■■□□□ 1.26
RAB40ALP0C0E4 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
RAB40ALP0C0E4 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
RAB40ALP0C0E4 YBX1P4-201ENST00000392794 808 ntBASIC22.92■■□□□ 1.26
RAB40ALP0C0E4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.92■■□□□ 1.26
RAB40ALP0C0E4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RAB40ALP0C0E4 AL451085.2-201ENST00000605085 799 ntBASIC22.92■■□□□ 1.26
RAB40ALP0C0E4 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RAB40ALP0C0E4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
RAB40ALP0C0E4 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RAB40ALP0C0E4 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
RAB40ALP0C0E4 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RAB40ALP0C0E4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
RAB40ALP0C0E4 MTX2-204ENST00000443241 799 ntTSL 3 BASIC22.91■■□□□ 1.26
RAB40ALP0C0E4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RAB40ALP0C0E4 AL035685.1-201ENST00000636663 812 ntBASIC22.91■■□□□ 1.26
RAB40ALP0C0E4 LINC01003-201ENST00000564834 1764 ntBASIC22.91■■□□□ 1.26
RAB40ALP0C0E4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC22.91■■□□□ 1.26
RAB40ALP0C0E4 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC22.9■■□□□ 1.26
RAB40ALP0C0E4 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RAB40ALP0C0E4 PVT1_1.1-201ENST00000615125 194 ntBASIC22.9■■□□□ 1.26
RAB40ALP0C0E4 KRT8P33-201ENST00000508125 1423 ntBASIC22.9■■□□□ 1.26
RAB40ALP0C0E4 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC22.9■■□□□ 1.26
RAB40ALP0C0E4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.89■■□□□ 1.26
RAB40ALP0C0E4 AL449106.1-201ENST00000608517 1980 ntBASIC22.89■■□□□ 1.26
RAB40ALP0C0E4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RAB40ALP0C0E4 IDNK-201ENST00000376417 511 ntTSL 5 BASIC22.89■■□□□ 1.25
RAB40ALP0C0E4 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RAB40ALP0C0E4 AC103834.1-201ENST00000520383 144 ntBASIC22.89■■□□□ 1.25
RAB40ALP0C0E4 MIR4508-201ENST00000584178 70 ntBASIC22.89■■□□□ 1.25
RAB40ALP0C0E4 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RAB40ALP0C0E4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RAB40ALP0C0E4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.88■■□□□ 1.25
RAB40ALP0C0E4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
RAB40ALP0C0E4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.88■■□□□ 1.25
RAB40ALP0C0E4 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms