Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SNRPA1P09661 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC31.48■■■□□ 2.63
SNRPA1P09661 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC31.47■■■□□ 2.63
SNRPA1P09661 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC31.47■■■□□ 2.63
SNRPA1P09661 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC31.47■■■□□ 2.63
SNRPA1P09661 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC31.47■■■□□ 2.63
SNRPA1P09661 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC31.47■■■□□ 2.63
SNRPA1P09661 AL451085.2-201ENST00000605085 799 ntBASIC31.47■■■□□ 2.63
SNRPA1P09661 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
SNRPA1P09661 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
SNRPA1P09661 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
SNRPA1P09661 AC103834.1-201ENST00000520383 144 ntBASIC31.46■■■□□ 2.63
SNRPA1P09661 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
SNRPA1P09661 KRT8P33-201ENST00000508125 1423 ntBASIC31.46■■■□□ 2.63
SNRPA1P09661 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
SNRPA1P09661 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
SNRPA1P09661 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
SNRPA1P09661 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
SNRPA1P09661 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC31.45■■■□□ 2.63
SNRPA1P09661 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC31.45■■■□□ 2.62
SNRPA1P09661 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SNRPA1P09661 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SNRPA1P09661 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC31.44■■■□□ 2.62
SNRPA1P09661 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SNRPA1P09661 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
SNRPA1P09661 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SNRPA1P09661 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC31.44■■■□□ 2.62
SNRPA1P09661 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
SNRPA1P09661 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SNRPA1P09661 AL035685.1-201ENST00000636663 812 ntBASIC31.43■■■□□ 2.62
SNRPA1P09661 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC31.43■■■□□ 2.62
SNRPA1P09661 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
SNRPA1P09661 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
SNRPA1P09661 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC31.41■■■□□ 2.62
SNRPA1P09661 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC31.41■■■□□ 2.62
SNRPA1P09661 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
SNRPA1P09661 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
SNRPA1P09661 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC31.4■■■□□ 2.62
SNRPA1P09661 IDNK-201ENST00000376417 511 ntTSL 5 BASIC31.4■■■□□ 2.62
SNRPA1P09661 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
SNRPA1P09661 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
SNRPA1P09661 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
SNRPA1P09661 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
SNRPA1P09661 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC31.39■■■□□ 2.62
SNRPA1P09661 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC31.38■■■□□ 2.61
SNRPA1P09661 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
SNRPA1P09661 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
SNRPA1P09661 YBX1P4-201ENST00000392794 808 ntBASIC31.38■■■□□ 2.61
SNRPA1P09661 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC31.38■■■□□ 2.61
SNRPA1P09661 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
SNRPA1P09661 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
SNRPA1P09661 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
SNRPA1P09661 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC31.37■■■□□ 2.61
SNRPA1P09661 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
SNRPA1P09661 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
SNRPA1P09661 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
SNRPA1P09661 MTX2-204ENST00000443241 799 ntTSL 3 BASIC31.36■■■□□ 2.61
SNRPA1P09661 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC31.36■■■□□ 2.61
SNRPA1P09661 MIR4508-201ENST00000584178 70 ntBASIC31.36■■■□□ 2.61
SNRPA1P09661 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
SNRPA1P09661 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
SNRPA1P09661 AC087393.1-201ENST00000582896 145 ntBASIC31.35■■■□□ 2.61
SNRPA1P09661 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
SNRPA1P09661 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC31.34■■■□□ 2.61
SNRPA1P09661 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
SNRPA1P09661 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SNRPA1P09661 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
SNRPA1P09661 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC31.34■■■□□ 2.61
SNRPA1P09661 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
SNRPA1P09661 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SNRPA1P09661 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SNRPA1P09661 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
SNRPA1P09661 BX255925.1-201ENST00000566954 1854 ntBASIC31.33■■■□□ 2.61
SNRPA1P09661 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
SNRPA1P09661 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
SNRPA1P09661 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
SNRPA1P09661 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
SNRPA1P09661 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SNRPA1P09661 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
SNRPA1P09661 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC31.32■■■□□ 2.6
SNRPA1P09661 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC31.32■■■□□ 2.6
SNRPA1P09661 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
SNRPA1P09661 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC31.31■■■□□ 2.6
SNRPA1P09661 AC019171.1-201ENST00000601251 1056 ntBASIC31.31■■■□□ 2.6
SNRPA1P09661 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
SNRPA1P09661 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC31.3■■■□□ 2.6
SNRPA1P09661 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
SNRPA1P09661 RPS2P7-201ENST00000447334 885 ntBASIC31.3■■■□□ 2.6
SNRPA1P09661 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
SNRPA1P09661 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
SNRPA1P09661 TRIR-205ENST00000592273 783 ntTSL 3 BASIC31.29■■■□□ 2.6
SNRPA1P09661 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
SNRPA1P09661 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
SNRPA1P09661 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SNRPA1P09661 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
SNRPA1P09661 AC009299.2-201ENST00000482477 511 ntBASIC31.28■■■□□ 2.6
SNRPA1P09661 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC31.28■■■□□ 2.6
SNRPA1P09661 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
SNRPA1P09661 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SNRPA1P09661 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms