Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
TRAF3IP2O43734 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.76■■□□□ 1.07
TRAF3IP2O43734 AC091060.1-201ENST00000623524 1766 ntBASIC21.76■■□□□ 1.07
TRAF3IP2O43734 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRAF3IP2O43734 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRAF3IP2O43734 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TRAF3IP2O43734 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.75■■□□□ 1.07
TRAF3IP2O43734 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
TRAF3IP2O43734 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRAF3IP2O43734 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAF3IP2O43734 AC025884.2-201ENST00000553429 711 ntBASIC21.74■■□□□ 1.07
TRAF3IP2O43734 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.74■■□□□ 1.07
TRAF3IP2O43734 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAF3IP2O43734 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.74■■□□□ 1.07
TRAF3IP2O43734 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRAF3IP2O43734 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRAF3IP2O43734 GPX1-201ENST00000419349 1106 ntBASIC21.73■■□□□ 1.07
TRAF3IP2O43734 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.73■■□□□ 1.07
TRAF3IP2O43734 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
TRAF3IP2O43734 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRAF3IP2O43734 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRAF3IP2O43734 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
TRAF3IP2O43734 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAF3IP2O43734 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.72■■□□□ 1.07
TRAF3IP2O43734 ECEL1P2-201ENST00000461596 1295 ntBASIC21.72■■□□□ 1.07
TRAF3IP2O43734 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.72■■□□□ 1.07
TRAF3IP2O43734 AC092803.2-201ENST00000564287 1899 ntBASIC21.72■■□□□ 1.07
TRAF3IP2O43734 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRAF3IP2O43734 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRAF3IP2O43734 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRAF3IP2O43734 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
TRAF3IP2O43734 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.71■■□□□ 1.07
TRAF3IP2O43734 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
TRAF3IP2O43734 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.7■■□□□ 1.06
TRAF3IP2O43734 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.7■■□□□ 1.06
TRAF3IP2O43734 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.7■■□□□ 1.06
TRAF3IP2O43734 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRAF3IP2O43734 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRAF3IP2O43734 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.69■■□□□ 1.06
TRAF3IP2O43734 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
TRAF3IP2O43734 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRAF3IP2O43734 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.69■■□□□ 1.06
TRAF3IP2O43734 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
TRAF3IP2O43734 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.69■■□□□ 1.06
TRAF3IP2O43734 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRAF3IP2O43734 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.68■■□□□ 1.06
TRAF3IP2O43734 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.68■■□□□ 1.06
TRAF3IP2O43734 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRAF3IP2O43734 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRAF3IP2O43734 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.67■■□□□ 1.06
TRAF3IP2O43734 AC145676.1-201ENST00000514988 2004 ntBASIC21.67■■□□□ 1.06
TRAF3IP2O43734 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
TRAF3IP2O43734 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRAF3IP2O43734 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRAF3IP2O43734 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.67■■□□□ 1.06
TRAF3IP2O43734 SMPD5-203ENST00000639008 1464 ntBASIC21.67■■□□□ 1.06
TRAF3IP2O43734 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRAF3IP2O43734 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRAF3IP2O43734 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.66■■□□□ 1.06
TRAF3IP2O43734 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRAF3IP2O43734 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.66■■□□□ 1.06
TRAF3IP2O43734 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRAF3IP2O43734 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.66■■□□□ 1.06
TRAF3IP2O43734 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRAF3IP2O43734 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.66■■□□□ 1.06
TRAF3IP2O43734 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRAF3IP2O43734 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.66■■□□□ 1.06
TRAF3IP2O43734 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
TRAF3IP2O43734 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAF3IP2O43734 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.65■■□□□ 1.06
TRAF3IP2O43734 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAF3IP2O43734 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAF3IP2O43734 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.65■■□□□ 1.06
TRAF3IP2O43734 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.65■■□□□ 1.06
TRAF3IP2O43734 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.65■■□□□ 1.06
TRAF3IP2O43734 DUSP8P4-201ENST00000399538 1761 ntBASIC21.65■■□□□ 1.06
TRAF3IP2O43734 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAF3IP2O43734 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
TRAF3IP2O43734 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRAF3IP2O43734 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.64■■□□□ 1.05
TRAF3IP2O43734 MIR3960-201ENST00000583311 91 ntBASIC21.64■■□□□ 1.05
TRAF3IP2O43734 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.64■■□□□ 1.05
TRAF3IP2O43734 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
TRAF3IP2O43734 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRAF3IP2O43734 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRAF3IP2O43734 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.63■■□□□ 1.05
TRAF3IP2O43734 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.63■■□□□ 1.05
TRAF3IP2O43734 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRAF3IP2O43734 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRAF3IP2O43734 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
TRAF3IP2O43734 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRAF3IP2O43734 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.62■■□□□ 1.05
TRAF3IP2O43734 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRAF3IP2O43734 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
TRAF3IP2O43734 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRAF3IP2O43734 ERN1-208ENST00000606895 2068 ntBASIC21.61■■□□□ 1.05
TRAF3IP2O43734 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.61■■□□□ 1.05
TRAF3IP2O43734 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.61■■□□□ 1.05
TRAF3IP2O43734 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRAF3IP2O43734 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms