Protein–RNA interactions for Protein: O15297

PPM1D, Protein phosphatase 1D, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1DO15297 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
PPM1DO15297 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
PPM1DO15297 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.81■■□□□ 1.4
PPM1DO15297 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
PPM1DO15297 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.81■■□□□ 1.4
PPM1DO15297 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.81■■□□□ 1.4
PPM1DO15297 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PPM1DO15297 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.81■■□□□ 1.4
PPM1DO15297 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PPM1DO15297 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.81■■□□□ 1.4
PPM1DO15297 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PPM1DO15297 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.8■■□□□ 1.4
PPM1DO15297 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
PPM1DO15297 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PPM1DO15297 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PPM1DO15297 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
PPM1DO15297 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
PPM1DO15297 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.79■■□□□ 1.4
PPM1DO15297 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PPM1DO15297 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.79■■□□□ 1.4
PPM1DO15297 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.79■■□□□ 1.4
PPM1DO15297 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PPM1DO15297 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
PPM1DO15297 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PPM1DO15297 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PPM1DO15297 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PPM1DO15297 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PPM1DO15297 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
PPM1DO15297 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
PPM1DO15297 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PPM1DO15297 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
PPM1DO15297 RARRES2P1-201ENST00000474487 481 ntBASIC23.77■■□□□ 1.4
PPM1DO15297 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PPM1DO15297 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PPM1DO15297 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.76■■□□□ 1.39
PPM1DO15297 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PPM1DO15297 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.76■■□□□ 1.39
PPM1DO15297 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
PPM1DO15297 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.75■■□□□ 1.39
PPM1DO15297 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PPM1DO15297 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PPM1DO15297 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
PPM1DO15297 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PPM1DO15297 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23.74■■□□□ 1.39
PPM1DO15297 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PPM1DO15297 MIR6765-201ENST00000614092 87 ntBASIC23.74■■□□□ 1.39
PPM1DO15297 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PPM1DO15297 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PPM1DO15297 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PPM1DO15297 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PPM1DO15297 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
PPM1DO15297 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
PPM1DO15297 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PPM1DO15297 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
PPM1DO15297 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.72■■□□□ 1.39
PPM1DO15297 AC018755.3-202ENST00000596210 929 ntBASIC23.72■■□□□ 1.39
PPM1DO15297 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PPM1DO15297 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
PPM1DO15297 AL121749.1-202ENST00000609313 2153 ntBASIC23.72■■□□□ 1.39
PPM1DO15297 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PPM1DO15297 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.71■■□□□ 1.39
PPM1DO15297 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
PPM1DO15297 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.71■■□□□ 1.39
PPM1DO15297 BHLHE23-202ENST00000612929 1109 ntBASIC23.71■■□□□ 1.39
PPM1DO15297 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
PPM1DO15297 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PPM1DO15297 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PPM1DO15297 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PPM1DO15297 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
PPM1DO15297 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.69■■□□□ 1.38
PPM1DO15297 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.69■■□□□ 1.38
PPM1DO15297 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PPM1DO15297 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PPM1DO15297 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
PPM1DO15297 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
PPM1DO15297 AC010980.1-201ENST00000587192 1142 ntBASIC23.68■■□□□ 1.38
PPM1DO15297 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.68■■□□□ 1.38
PPM1DO15297 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.68■■□□□ 1.38
PPM1DO15297 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
PPM1DO15297 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
PPM1DO15297 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
PPM1DO15297 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PPM1DO15297 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PPM1DO15297 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
PPM1DO15297 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PPM1DO15297 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PPM1DO15297 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PPM1DO15297 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
PPM1DO15297 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.66■■□□□ 1.38
PPM1DO15297 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PPM1DO15297 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PPM1DO15297 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
PPM1DO15297 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
PPM1DO15297 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
PPM1DO15297 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PPM1DO15297 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
PPM1DO15297 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PPM1DO15297 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PPM1DO15297 AC139795.1-202ENST00000500444 432 ntBASIC23.65■■□□□ 1.38
PPM1DO15297 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms