Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TSPAN4O14817 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TSPAN4O14817 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TSPAN4O14817 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.11■□□□□ 0.81
TSPAN4O14817 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TSPAN4O14817 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TSPAN4O14817 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TSPAN4O14817 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TSPAN4O14817 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TSPAN4O14817 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TSPAN4O14817 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TSPAN4O14817 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
TSPAN4O14817 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
TSPAN4O14817 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TSPAN4O14817 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TSPAN4O14817 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.09■□□□□ 0.81
TSPAN4O14817 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TSPAN4O14817 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TSPAN4O14817 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TSPAN4O14817 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TSPAN4O14817 AP006261.1-201ENST00000584783 668 ntBASIC20.09■□□□□ 0.81
TSPAN4O14817 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.09■□□□□ 0.81
TSPAN4O14817 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TSPAN4O14817 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TSPAN4O14817 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
TSPAN4O14817 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TSPAN4O14817 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TSPAN4O14817 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
TSPAN4O14817 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TSPAN4O14817 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
TSPAN4O14817 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TSPAN4O14817 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.08■□□□□ 0.8
TSPAN4O14817 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TSPAN4O14817 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TSPAN4O14817 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TSPAN4O14817 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TSPAN4O14817 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TSPAN4O14817 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TSPAN4O14817 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TSPAN4O14817 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TSPAN4O14817 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TSPAN4O14817 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TSPAN4O14817 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TSPAN4O14817 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
TSPAN4O14817 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
TSPAN4O14817 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TSPAN4O14817 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
TSPAN4O14817 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TSPAN4O14817 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TSPAN4O14817 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TSPAN4O14817 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TSPAN4O14817 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TSPAN4O14817 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TSPAN4O14817 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
TSPAN4O14817 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TSPAN4O14817 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TSPAN4O14817 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TSPAN4O14817 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
TSPAN4O14817 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
TSPAN4O14817 AC005559.1-201ENST00000589661 871 ntBASIC20.04■□□□□ 0.8
TSPAN4O14817 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TSPAN4O14817 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TSPAN4O14817 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TSPAN4O14817 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TSPAN4O14817 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
TSPAN4O14817 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TSPAN4O14817 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TSPAN4O14817 MIR3665-201ENST00000578708 105 ntBASIC20.03■□□□□ 0.8
TSPAN4O14817 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.03■□□□□ 0.8
TSPAN4O14817 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TSPAN4O14817 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.02■□□□□ 0.8
TSPAN4O14817 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TSPAN4O14817 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TSPAN4O14817 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TSPAN4O14817 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TSPAN4O14817 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
TSPAN4O14817 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TSPAN4O14817 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TSPAN4O14817 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TSPAN4O14817 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.01■□□□□ 0.79
TSPAN4O14817 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TSPAN4O14817 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TSPAN4O14817 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TSPAN4O14817 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TSPAN4O14817 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
TSPAN4O14817 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TSPAN4O14817 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20■□□□□ 0.79
TSPAN4O14817 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20■□□□□ 0.79
TSPAN4O14817 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TSPAN4O14817 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20■□□□□ 0.79
TSPAN4O14817 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TSPAN4O14817 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20■□□□□ 0.79
TSPAN4O14817 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20■□□□□ 0.79
TSPAN4O14817 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20■□□□□ 0.79
TSPAN4O14817 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20■□□□□ 0.79
TSPAN4O14817 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TSPAN4O14817 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20■□□□□ 0.79
TSPAN4O14817 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TSPAN4O14817 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TSPAN4O14817 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms