Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC24■■□□□ 1.43
CDX4O14627 AP002414.2-202ENST00000590929 1450 ntBASIC24■■□□□ 1.43
CDX4O14627 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CDX4O14627 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24■■□□□ 1.43
CDX4O14627 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
CDX4O14627 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CDX4O14627 UNC93B8-201ENST00000511903 705 ntBASIC23.99■■□□□ 1.43
CDX4O14627 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
CDX4O14627 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CDX4O14627 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDX4O14627 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
CDX4O14627 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.98■■□□□ 1.43
CDX4O14627 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDX4O14627 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CDX4O14627 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDX4O14627 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.98■■□□□ 1.43
CDX4O14627 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
CDX4O14627 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
CDX4O14627 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDX4O14627 ABCB10P3-201ENST00000561950 2166 ntBASIC23.98■■□□□ 1.43
CDX4O14627 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CDX4O14627 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CDX4O14627 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CDX4O14627 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.97■■□□□ 1.43
CDX4O14627 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CDX4O14627 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.97■■□□□ 1.43
CDX4O14627 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
CDX4O14627 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CDX4O14627 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDX4O14627 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.96■■□□□ 1.43
CDX4O14627 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDX4O14627 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CDX4O14627 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.96■■□□□ 1.43
CDX4O14627 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
CDX4O14627 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CDX4O14627 BX664725.1-201ENST00000438252 379 ntBASIC23.95■■□□□ 1.42
CDX4O14627 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CDX4O14627 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDX4O14627 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDX4O14627 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDX4O14627 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.94■■□□□ 1.42
CDX4O14627 KRT16P3-201ENST00000439127 1283 ntBASIC23.93■■□□□ 1.42
CDX4O14627 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.93■■□□□ 1.42
CDX4O14627 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDX4O14627 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDX4O14627 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDX4O14627 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDX4O14627 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CDX4O14627 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDX4O14627 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC23.91■■□□□ 1.42
CDX4O14627 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.91■■□□□ 1.42
CDX4O14627 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
CDX4O14627 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDX4O14627 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.91■■□□□ 1.42
CDX4O14627 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
CDX4O14627 AL139246.5-201ENST00000606645 996 ntBASIC23.91■■□□□ 1.42
CDX4O14627 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDX4O14627 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDX4O14627 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDX4O14627 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CDX4O14627 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.9■■□□□ 1.42
CDX4O14627 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDX4O14627 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
CDX4O14627 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CDX4O14627 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
CDX4O14627 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.89■■□□□ 1.41
CDX4O14627 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.89■■□□□ 1.41
CDX4O14627 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CDX4O14627 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CDX4O14627 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CDX4O14627 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDX4O14627 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDX4O14627 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDX4O14627 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.88■■□□□ 1.41
CDX4O14627 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CDX4O14627 AL139393.2-201ENST00000608721 2025 ntBASIC23.88■■□□□ 1.41
CDX4O14627 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC23.87■■□□□ 1.41
CDX4O14627 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CDX4O14627 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.87■■□□□ 1.41
CDX4O14627 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.87■■□□□ 1.41
CDX4O14627 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.87■■□□□ 1.41
CDX4O14627 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CDX4O14627 AC022616.5-201ENST00000518796 181 ntBASIC23.86■■□□□ 1.41
CDX4O14627 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.86■■□□□ 1.41
CDX4O14627 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC23.86■■□□□ 1.41
CDX4O14627 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
CDX4O14627 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDX4O14627 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
CDX4O14627 WHAMMP3-201ENST00000611636 1609 ntBASIC23.85■■□□□ 1.41
CDX4O14627 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.85■■□□□ 1.41
CDX4O14627 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.85■■□□□ 1.41
CDX4O14627 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
CDX4O14627 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CDX4O14627 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.85■■□□□ 1.41
CDX4O14627 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDX4O14627 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDX4O14627 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.84■■□□□ 1.41
CDX4O14627 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CDX4O14627 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.84■■□□□ 1.41
CDX4O14627 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.84■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms