Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC087393.1-201ENST00000582896 145 ntBASIC23.35■■□□□ 1.33
CCDC187A0A096LP49 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCDC187A0A096LP49 ABCB10P1-201ENST00000614297 2181 ntBASIC23.34■■□□□ 1.33
CCDC187A0A096LP49 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC187A0A096LP49 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
CCDC187A0A096LP49 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC187A0A096LP49 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC187A0A096LP49 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CCDC187A0A096LP49 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
CCDC187A0A096LP49 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
CCDC187A0A096LP49 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CCDC187A0A096LP49 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.33■■□□□ 1.33
CCDC187A0A096LP49 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.33■■□□□ 1.33
CCDC187A0A096LP49 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CCDC187A0A096LP49 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CCDC187A0A096LP49 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCDC187A0A096LP49 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCDC187A0A096LP49 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CCDC187A0A096LP49 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
CCDC187A0A096LP49 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.31■■□□□ 1.32
CCDC187A0A096LP49 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.31■■□□□ 1.32
CCDC187A0A096LP49 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC23.31■■□□□ 1.32
CCDC187A0A096LP49 AC019069.1-201ENST00000610008 1333 ntBASIC23.31■■□□□ 1.32
CCDC187A0A096LP49 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCDC187A0A096LP49 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCDC187A0A096LP49 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.3■■□□□ 1.32
CCDC187A0A096LP49 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCDC187A0A096LP49 AL356441.2-201ENST00000443009 864 ntBASIC23.3■■□□□ 1.32
CCDC187A0A096LP49 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.3■■□□□ 1.32
CCDC187A0A096LP49 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.3■■□□□ 1.32
CCDC187A0A096LP49 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
CCDC187A0A096LP49 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCDC187A0A096LP49 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCDC187A0A096LP49 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.29■■□□□ 1.32
CCDC187A0A096LP49 RPS2P7-201ENST00000447334 885 ntBASIC23.29■■□□□ 1.32
CCDC187A0A096LP49 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC23.29■■□□□ 1.32
CCDC187A0A096LP49 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.29■■□□□ 1.32
CCDC187A0A096LP49 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.29■■□□□ 1.32
CCDC187A0A096LP49 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCDC187A0A096LP49 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCDC187A0A096LP49 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
CCDC187A0A096LP49 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.28■■□□□ 1.32
CCDC187A0A096LP49 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.28■■□□□ 1.32
CCDC187A0A096LP49 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.28■■□□□ 1.32
CCDC187A0A096LP49 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCDC187A0A096LP49 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC23.27■■□□□ 1.32
CCDC187A0A096LP49 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CCDC187A0A096LP49 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCDC187A0A096LP49 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.27■■□□□ 1.32
CCDC187A0A096LP49 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.27■■□□□ 1.32
CCDC187A0A096LP49 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCDC187A0A096LP49 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCDC187A0A096LP49 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
CCDC187A0A096LP49 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCDC187A0A096LP49 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCDC187A0A096LP49 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.27■■□□□ 1.32
CCDC187A0A096LP49 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.27■■□□□ 1.32
CCDC187A0A096LP49 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.26■■□□□ 1.31
CCDC187A0A096LP49 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCDC187A0A096LP49 AC239859.2-201ENST00000444165 318 ntBASIC23.26■■□□□ 1.31
CCDC187A0A096LP49 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCDC187A0A096LP49 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CCDC187A0A096LP49 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.25■■□□□ 1.31
CCDC187A0A096LP49 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCDC187A0A096LP49 LONRF2P2-201ENST00000439212 571 ntBASIC23.25■■□□□ 1.31
CCDC187A0A096LP49 Z92544.1-202ENST00000571933 1220 ntBASIC23.25■■□□□ 1.31
CCDC187A0A096LP49 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
CCDC187A0A096LP49 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.25■■□□□ 1.31
CCDC187A0A096LP49 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.24■■□□□ 1.31
CCDC187A0A096LP49 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC187A0A096LP49 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
CCDC187A0A096LP49 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
CCDC187A0A096LP49 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.24■■□□□ 1.31
CCDC187A0A096LP49 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC187A0A096LP49 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC187A0A096LP49 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC187A0A096LP49 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.23■■□□□ 1.31
CCDC187A0A096LP49 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC23.23■■□□□ 1.31
CCDC187A0A096LP49 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC187A0A096LP49 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC187A0A096LP49 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC187A0A096LP49 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.22■■□□□ 1.31
CCDC187A0A096LP49 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC187A0A096LP49 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.22■■□□□ 1.31
CCDC187A0A096LP49 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.21■■□□□ 1.31
CCDC187A0A096LP49 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC187A0A096LP49 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC187A0A096LP49 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC187A0A096LP49 KRT18P10-201ENST00000388836 1287 ntBASIC23.2■■□□□ 1.3
CCDC187A0A096LP49 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC187A0A096LP49 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.19■■□□□ 1.3
CCDC187A0A096LP49 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC187A0A096LP49 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC187A0A096LP49 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.18■■□□□ 1.3
CCDC187A0A096LP49 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
CCDC187A0A096LP49 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.18■■□□□ 1.3
CCDC187A0A096LP49 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC187A0A096LP49 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.18■■□□□ 1.3
CCDC187A0A096LP49 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.18■■□□□ 1.3
CCDC187A0A096LP49 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms