Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC13.68□□□□□ -0.22
TRGV9Q99603 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
TRGV9Q99603 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV9Q99603 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC13.68□□□□□ -0.22
TRGV9Q99603 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV9Q99603 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC13.68□□□□□ -0.22
TRGV9Q99603 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC13.68□□□□□ -0.22
TRGV9Q99603 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV9Q99603 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV9Q99603 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV9Q99603 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC13.68□□□□□ -0.22
TRGV9Q99603 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV9Q99603 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV9Q99603 ADM-208ENST00000534464 1640 ntTSL 2 BASIC13.68□□□□□ -0.22
TRGV9Q99603 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
TRGV9Q99603 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRGV9Q99603 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV9Q99603 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV9Q99603 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
TRGV9Q99603 AC106886.4-201ENST00000623557 2502 ntBASIC13.67□□□□□ -0.22
TRGV9Q99603 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC13.67□□□□□ -0.22
TRGV9Q99603 LINC02012-201ENST00000608206 1725 ntBASIC13.67□□□□□ -0.22
TRGV9Q99603 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV9Q99603 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV9Q99603 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV9Q99603 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV9Q99603 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV9Q99603 AMT-250ENST00000637682 1823 ntTSL 5 BASIC13.67□□□□□ -0.22
TRGV9Q99603 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV9Q99603 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV9Q99603 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV9Q99603 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV9Q99603 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV9Q99603 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV9Q99603 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
TRGV9Q99603 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV9Q99603 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV9Q99603 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV9Q99603 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV9Q99603 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC13.67□□□□□ -0.22
TRGV9Q99603 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV9Q99603 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV9Q99603 MIR662-201ENST00000384847 95 ntBASIC13.67□□□□□ -0.22
TRGV9Q99603 COX5BP2-201ENST00000392354 334 ntBASIC13.67□□□□□ -0.22
TRGV9Q99603 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV9Q99603 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC13.67□□□□□ -0.22
TRGV9Q99603 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV9Q99603 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13.67□□□□□ -0.22
TRGV9Q99603 TK1-204ENST00000590430 683 ntTSL 3 BASIC13.67□□□□□ -0.22
TRGV9Q99603 SPEG-225ENST00000617028 815 ntTSL 5 BASIC13.67□□□□□ -0.22
TRGV9Q99603 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC13.67□□□□□ -0.22
TRGV9Q99603 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV9Q99603 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV9Q99603 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TRGV9Q99603 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV9Q99603 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV9Q99603 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV9Q99603 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV9Q99603 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TRGV9Q99603 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV9Q99603 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV9Q99603 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV9Q99603 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV9Q99603 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV9Q99603 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV9Q99603 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV9Q99603 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TRGV9Q99603 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV9Q99603 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRGV9Q99603 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TRGV9Q99603 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV9Q99603 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV9Q99603 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV9Q99603 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.66□□□□□ -0.22
TRGV9Q99603 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
TRGV9Q99603 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
TRGV9Q99603 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV9Q99603 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV9Q99603 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV9Q99603 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV9Q99603 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV9Q99603 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV9Q99603 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC13.66□□□□□ -0.22
TRGV9Q99603 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV9Q99603 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV9Q99603 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV9Q99603 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV9Q99603 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV9Q99603 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
TRGV9Q99603 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV9Q99603 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV9Q99603 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC13.66□□□□□ -0.22
TRGV9Q99603 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
TRGV9Q99603 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV9Q99603 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC13.66□□□□□ -0.22
TRGV9Q99603 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC13.66□□□□□ -0.22
TRGV9Q99603 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC13.66□□□□□ -0.22
TRGV9Q99603 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
TRGV9Q99603 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC13.66□□□□□ -0.22
TRGV9Q99603 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms