Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.51■□□□□ 0.39
RAB3IL1Q8TBN0 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.51■□□□□ 0.39
RAB3IL1Q8TBN0 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAB3IL1Q8TBN0 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB3IL1Q8TBN0 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
RAB3IL1Q8TBN0 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.51■□□□□ 0.39
RAB3IL1Q8TBN0 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAB3IL1Q8TBN0 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB3IL1Q8TBN0 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB3IL1Q8TBN0 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB3IL1Q8TBN0 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB3IL1Q8TBN0 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAB3IL1Q8TBN0 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.51■□□□□ 0.39
RAB3IL1Q8TBN0 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB3IL1Q8TBN0 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RAB3IL1Q8TBN0 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB3IL1Q8TBN0 AC011270.2-201ENST00000624293 2550 ntBASIC17.5■□□□□ 0.39
RAB3IL1Q8TBN0 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAB3IL1Q8TBN0 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAB3IL1Q8TBN0 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RAB3IL1Q8TBN0 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.5■□□□□ 0.39
RAB3IL1Q8TBN0 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB3IL1Q8TBN0 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB3IL1Q8TBN0 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAB3IL1Q8TBN0 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.5■□□□□ 0.39
RAB3IL1Q8TBN0 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB3IL1Q8TBN0 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAB3IL1Q8TBN0 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.5■□□□□ 0.39
RAB3IL1Q8TBN0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.5■□□□□ 0.39
RAB3IL1Q8TBN0 AC113404.2-201ENST00000507884 177 ntBASIC17.5■□□□□ 0.39
RAB3IL1Q8TBN0 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAB3IL1Q8TBN0 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.5■□□□□ 0.39
RAB3IL1Q8TBN0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RAB3IL1Q8TBN0 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
RAB3IL1Q8TBN0 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB3IL1Q8TBN0 AC116353.5-201ENST00000638148 1699 ntBASIC17.5■□□□□ 0.39
RAB3IL1Q8TBN0 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB3IL1Q8TBN0 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RAB3IL1Q8TBN0 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.5■□□□□ 0.39
RAB3IL1Q8TBN0 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB3IL1Q8TBN0 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RAB3IL1Q8TBN0 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RAB3IL1Q8TBN0 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB3IL1Q8TBN0 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RAB3IL1Q8TBN0 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.5■□□□□ 0.39
RAB3IL1Q8TBN0 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB3IL1Q8TBN0 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB3IL1Q8TBN0 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB3IL1Q8TBN0 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB3IL1Q8TBN0 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB3IL1Q8TBN0 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
RAB3IL1Q8TBN0 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 BX088651.1-201ENST00000540551 451 ntBASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.49■□□□□ 0.39
RAB3IL1Q8TBN0 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB3IL1Q8TBN0 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB3IL1Q8TBN0 AC060834.1-201ENST00000443027 2032 ntBASIC17.48■□□□□ 0.39
RAB3IL1Q8TBN0 AC092338.2-201ENST00000568827 1415 ntBASIC17.48■□□□□ 0.39
RAB3IL1Q8TBN0 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB3IL1Q8TBN0 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.48■□□□□ 0.39
RAB3IL1Q8TBN0 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.48■□□□□ 0.39
RAB3IL1Q8TBN0 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB3IL1Q8TBN0 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms