Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.54■□□□□ 0.4
CSNK1DP48730 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.54■□□□□ 0.4
CSNK1DP48730 AL353135.1-201ENST00000606729 504 ntBASIC17.54■□□□□ 0.4
CSNK1DP48730 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.54■□□□□ 0.4
CSNK1DP48730 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
CSNK1DP48730 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSNK1DP48730 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSNK1DP48730 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CSNK1DP48730 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSNK1DP48730 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CSNK1DP48730 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CSNK1DP48730 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
CSNK1DP48730 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CSNK1DP48730 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSNK1DP48730 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CSNK1DP48730 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSNK1DP48730 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CSNK1DP48730 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.53■□□□□ 0.4
CSNK1DP48730 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSNK1DP48730 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CSNK1DP48730 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSNK1DP48730 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CSNK1DP48730 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CSNK1DP48730 LINC00896-202ENST00000609602 2128 ntBASIC17.53■□□□□ 0.4
CSNK1DP48730 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CSNK1DP48730 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.53■□□□□ 0.4
CSNK1DP48730 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.53■□□□□ 0.4
CSNK1DP48730 KRT18P27-201ENST00000427733 1299 ntBASIC17.53■□□□□ 0.4
CSNK1DP48730 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.53■□□□□ 0.4
CSNK1DP48730 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSNK1DP48730 AC093909.1-201ENST00000504731 1122 ntBASIC17.53■□□□□ 0.4
CSNK1DP48730 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CSNK1DP48730 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.53■□□□□ 0.4
CSNK1DP48730 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.53■□□□□ 0.4
CSNK1DP48730 AL139424.1-201ENST00000607572 797 ntBASIC17.53■□□□□ 0.4
CSNK1DP48730 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.53■□□□□ 0.4
CSNK1DP48730 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.53■□□□□ 0.4
CSNK1DP48730 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.53■□□□□ 0.4
CSNK1DP48730 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSNK1DP48730 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.53■□□□□ 0.4
CSNK1DP48730 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSNK1DP48730 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.53■□□□□ 0.4
CSNK1DP48730 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
CSNK1DP48730 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.53■□□□□ 0.4
CSNK1DP48730 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CSNK1DP48730 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CSNK1DP48730 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CSNK1DP48730 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CSNK1DP48730 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CSNK1DP48730 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CSNK1DP48730 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.52■□□□□ 0.4
CSNK1DP48730 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.52■□□□□ 0.4
CSNK1DP48730 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CSNK1DP48730 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.52■□□□□ 0.4
CSNK1DP48730 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.52■□□□□ 0.4
CSNK1DP48730 AC105339.3-201ENST00000560043 636 ntBASIC17.52■□□□□ 0.4
CSNK1DP48730 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.52■□□□□ 0.4
CSNK1DP48730 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.52■□□□□ 0.4
CSNK1DP48730 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CSNK1DP48730 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.52■□□□□ 0.4
CSNK1DP48730 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.52■□□□□ 0.4
CSNK1DP48730 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CSNK1DP48730 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CSNK1DP48730 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CSNK1DP48730 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CSNK1DP48730 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CSNK1DP48730 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CSNK1DP48730 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CSNK1DP48730 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1DP48730 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
CSNK1DP48730 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1DP48730 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.51■□□□□ 0.39
CSNK1DP48730 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1DP48730 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1DP48730 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1DP48730 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1DP48730 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1DP48730 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1DP48730 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1DP48730 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1DP48730 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CSNK1DP48730 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1DP48730 AC073621.1-201ENST00000392730 636 ntBASIC17.51■□□□□ 0.39
CSNK1DP48730 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1DP48730 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1DP48730 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.51■□□□□ 0.39
CSNK1DP48730 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.51■□□□□ 0.39
CSNK1DP48730 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
CSNK1DP48730 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.51■□□□□ 0.39
CSNK1DP48730 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CSNK1DP48730 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.51■□□□□ 0.39
CSNK1DP48730 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1DP48730 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.51■□□□□ 0.39
CSNK1DP48730 MIR7706-201ENST00000613747 67 ntBASIC17.51■□□□□ 0.39
CSNK1DP48730 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.51■□□□□ 0.39
CSNK1DP48730 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CSNK1DP48730 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1DP48730 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.51■□□□□ 0.39
CSNK1DP48730 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CSNK1DP48730 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms